Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SNORA77B-201ENST00000578179 125 ntBASIC1.28□□□□□ -2.2
CNTNAP1P78357 AL354950.2-201ENST00000617939 290 ntBASIC1.28□□□□□ -2.2
CNTNAP1P78357 AC103705.1-201ENST00000619013 241 ntBASIC1.28□□□□□ -2.2
CNTNAP1P78357 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.28□□□□□ -2.2
CNTNAP1P78357 AL359697.1-201ENST00000624879 587 ntBASIC1.28□□□□□ -2.2
CNTNAP1P78357 AC010487.4-201ENST00000637027 61 ntBASIC1.28□□□□□ -2.2
CNTNAP1P78357 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.21
CNTNAP1P78357 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CNTNAP1P78357 AC009541.1-201ENST00000438279 2662 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 Y_RNA.67-201ENST00000362870 100 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 MIR300-201ENST00000401138 83 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 MIR1267-201ENST00000408723 78 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 RPS26P42-201ENST00000413485 326 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 USP9YP28-201ENST00000435142 589 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 AC099677.2-201ENST00000436385 175 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 RPS29P27-201ENST00000463711 170 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 HMGN1P13-201ENST00000505795 138 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 AC079140.3-201ENST00000511111 550 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 AC091133.4-201ENST00000511142 308 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 AC067942.3-201ENST00000512025 362 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 SNORA40.12-201ENST00000516329 111 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 RNU6-856P-201ENST00000516959 98 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.27□□□□□ -2.21
CNTNAP1P78357 AP003034.1-201ENST00000534621 422 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 OSBPL9P5-201ENST00000542581 171 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 MIR3973-201ENST00000579824 107 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.27□□□□□ -2.21
CNTNAP1P78357 AL353149.1-201ENST00000610667 244 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 Z69908.1-201ENST00000622603 247 ntBASIC1.27□□□□□ -2.21
CNTNAP1P78357 Y_RNA.1-201ENST00000352915 104 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 Y_RNA.132-201ENST00000363421 102 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 SNORD73A-201ENST00000386062 65 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 ARL5AP1-201ENST00000418991 388 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AL353193.1-201ENST00000421444 268 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AC245047.4-201ENST00000433189 144 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.26□□□□□ -2.21
CNTNAP1P78357 RPS3AP17-201ENST00000472594 777 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AC098862.1-201ENST00000504991 413 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 CENPUP1-201ENST00000526649 1202 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AC026470.2-201ENST00000561492 181 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 MIR4714-201ENST00000580728 77 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 CTHRC1P1-201ENST00000605383 469 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AC007684.1-201ENST00000609671 477 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AC078883.4-201ENST00000623218 367 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 AC010615.1-201ENST00000594254 1764 ntBASIC1.26□□□□□ -2.21
CNTNAP1P78357 SNORD114-23-201ENST00000363536 72 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 RNU6-1019P-201ENST00000364424 107 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 RNU6-1093P-201ENST00000391194 107 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.25□□□□□ -2.21
CNTNAP1P78357 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.25□□□□□ -2.21
CNTNAP1P78357 AC025465.4-201ENST00000513422 638 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 RNU6-1069P-201ENST00000516612 133 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 RNA5SP481-201ENST00000516814 122 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 HMGB1P33-201ENST00000563485 527 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.25□□□□□ -2.21
CNTNAP1P78357 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.25□□□□□ -2.21
CNTNAP1P78357 Z99497.2-201ENST00000603634 310 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 AC017083.3-201ENST00000609955 700 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 MIR6857-201ENST00000613267 93 ntBASIC1.25□□□□□ -2.21
CNTNAP1P78357 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CNTNAP1P78357 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CNTNAP1P78357 MIR302D-201ENST00000362275 68 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 Y_RNA.77-201ENST00000362962 107 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 SNORA63D-201ENST00000364359 132 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 Y_RNA.296-201ENST00000364930 108 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 MIR532-201ENST00000385025 91 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 Y_RNA.582-201ENST00000391023 95 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 AL606489.2-201ENST00000433886 234 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 HSPE1P9-201ENST00000440046 311 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.24□□□□□ -2.21
CNTNAP1P78357 AC069257.2-201ENST00000441819 155 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.24□□□□□ -2.21
CNTNAP1P78357 U8.21-201ENST00000459536 136 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 DEFB131C-201ENST00000528817 165 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 AP001330.5-201ENST00000607176 411 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 MIR8087-201ENST00000612745 78 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 MIR6513-201ENST00000621188 64 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 AL589743.1-201ENST00000551932 2712 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
CNTNAP1P78357 RNU6-862P-201ENST00000362804 105 ntBASIC1.23□□□□□ -2.21
CNTNAP1P78357 RNU5B-2P-201ENST00000363036 113 ntBASIC1.23□□□□□ -2.21
CNTNAP1P78357 RNU6-716P-201ENST00000365621 103 ntBASIC1.23□□□□□ -2.21
CNTNAP1P78357 Y_RNA.553-201ENST00000384670 102 ntBASIC1.23□□□□□ -2.21
CNTNAP1P78357 AL117342.1-201ENST00000404861 406 ntBASIC1.23□□□□□ -2.21
CNTNAP1P78357 AC090960.1-201ENST00000421072 306 ntBASIC1.23□□□□□ -2.21
CNTNAP1P78357 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.23□□□□□ -2.21
CNTNAP1P78357 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.23□□□□□ -2.21
CNTNAP1P78357 TPTE2P5-203ENST00000458118 728 ntBASIC1.23□□□□□ -2.21
CNTNAP1P78357 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms