Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU6-1305P-201ENST00000364353 104 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 Y_RNA.330-201ENST00000365230 109 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 SNORD115-7-201ENST00000365306 82 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 RNA5SP222-201ENST00000411039 105 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 AL445305.1-201ENST00000432577 575 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 MTATP6P16-201ENST00000434543 526 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 DAP3P1-201ENST00000441522 278 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.2□□□□□ -2.38
HIST1H3AP68431 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.2□□□□□ -2.38
HIST1H3AP68431 AL162424.1-201ENST00000602325 221 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 AL359999.1-201ENST00000604513 294 ntBASIC0.2□□□□□ -2.38
HIST1H3AP68431 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
HIST1H3AP68431 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.2□□□□□ -2.38
HIST1H3AP68431 RNU6-931P-201ENST00000363850 107 ntBASIC0.19□□□□□ -2.38
HIST1H3AP68431 AC016909.1-201ENST00000415916 166 ntBASIC0.19□□□□□ -2.38
HIST1H3AP68431 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.19□□□□□ -2.38
HIST1H3AP68431 RNU7-57P-201ENST00000459540 60 ntBASIC0.19□□□□□ -2.38
HIST1H3AP68431 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.19□□□□□ -2.38
HIST1H3AP68431 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.19□□□□□ -2.38
HIST1H3AP68431 AC011195.1-201ENST00000578177 177 ntBASIC0.19□□□□□ -2.38
HIST1H3AP68431 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
HIST1H3AP68431 TCL6_2.1-201ENST00000615162 119 ntBASIC0.19□□□□□ -2.38
HIST1H3AP68431 AL607023.1-201ENST00000620045 248 ntBASIC0.19□□□□□ -2.38
HIST1H3AP68431 Y_RNA.18-201ENST00000362461 102 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 RNU6-1287P-201ENST00000362914 107 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 RNU4-92P-201ENST00000363783 136 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 SNORA2.2-201ENST00000365473 135 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 RNU6-1060P-201ENST00000384664 107 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 RNU6-550P-201ENST00000391057 101 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 RNU6-1186P-201ENST00000410429 97 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.18□□□□□ -2.38
HIST1H3AP68431 STAG3L5P-204ENST00000443759 179 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.18□□□□□ -2.38
HIST1H3AP68431 LINC01399-202ENST00000458450 244 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AP003168.1-201ENST00000530091 307 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AC026470.2-201ENST00000561492 181 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AC023827.1-201ENST00000569247 97 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AC234772.3-201ENST00000602277 528 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AC068792.1-201ENST00000621354 417 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 U6.114-201ENST00000636407 96 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 AC100810.6-201ENST00000638068 285 ntBASIC0.18□□□□□ -2.38
HIST1H3AP68431 RNU5E-10P-201ENST00000363506 118 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 RNY1P12-201ENST00000364251 105 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 RNU6-660P-201ENST00000364566 109 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 RNU6-163P-201ENST00000384396 106 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 RNU6-1000P-201ENST00000391066 106 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 RPS3AP3-201ENST00000411933 242 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.17□□□□□ -2.38
HIST1H3AP68431 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.17□□□□□ -2.38
HIST1H3AP68431 AC016256.1-201ENST00000547971 354 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 AC004584.2-201ENST00000570407 410 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.17□□□□□ -2.38
HIST1H3AP68431 AC017083.3-201ENST00000609955 700 ntBASIC0.17□□□□□ -2.38
HIST1H3AP68431 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.17□□□□□ -2.38
HIST1H3AP68431 MIRLET7D-201ENST00000362263 87 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 RNU6-42P-201ENST00000384165 107 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 MTND3P17-201ENST00000416968 344 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 MTCO2P21-201ENST00000419780 677 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 AC008134.1-201ENST00000420943 193 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 AC244098.3-201ENST00000424803 96 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 MTCO2P23-201ENST00000425216 680 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 USP9YP25-201ENST00000457708 443 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.16□□□□□ -2.38
HIST1H3AP68431 HSPE1P23-201ENST00000509838 286 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.16□□□□□ -2.38
HIST1H3AP68431 AL096861.1-201ENST00000610899 123 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 AL391903.3-201ENST00000612158 163 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 AL078595.3-201ENST00000623815 1166 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 AL138960.2-201ENST00000625145 535 ntBASIC0.16□□□□□ -2.38
HIST1H3AP68431 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.16□□□□□ -2.38
HIST1H3AP68431 RNU6-1240P-201ENST00000365155 104 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HIST1H3AP68431 RNY1P8-201ENST00000383970 114 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 RNU6-1067P-201ENST00000384752 107 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 MIR586-201ENST00000385035 97 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 MIR518E-201ENST00000385252 88 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H3AP68431 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.15□□□□□ -2.39
HIST1H3AP68431 RPL23AP50-201ENST00000434149 455 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AL162725.1-201ENST00000435405 301 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC009237.7-201ENST00000447357 229 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.15□□□□□ -2.39
HIST1H3AP68431 OR9P1P-201ENST00000496431 281 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H3AP68431 RNU6-1220P-201ENST00000517126 108 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC022616.3-201ENST00000523940 148 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC131055.1-201ENST00000584626 316 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AL139418.1-201ENST00000613613 177 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 MIR6734-201ENST00000621166 68 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC138649.3-201ENST00000622154 254 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 MTND5P16-201ENST00000460269 1703 ntBASIC0.15□□□□□ -2.39
HIST1H3AP68431 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC106883.1-201ENST00000418805 562 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 AC104332.1-201ENST00000440471 797 ntBASIC0.14□□□□□ -2.39
HIST1H3AP68431 MTCO3P8-201ENST00000453691 755 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms