Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL078595.3-201ENST00000623815 1166 ntBASIC0.28□□□□□ -2.36
CDC42P60953 AC022418.1-201ENST00000624118 445 ntBASIC0.28□□□□□ -2.36
CDC42P60953 RNU5F-6P-201ENST00000362979 116 ntBASIC0.27□□□□□ -2.37
CDC42P60953 RNU6-169P-201ENST00000365336 107 ntBASIC0.27□□□□□ -2.37
CDC42P60953 SNORA2.2-201ENST00000365473 135 ntBASIC0.27□□□□□ -2.37
CDC42P60953 RNU6-1200P-201ENST00000384162 107 ntBASIC0.27□□□□□ -2.37
CDC42P60953 RNU6-163P-201ENST00000384396 106 ntBASIC0.27□□□□□ -2.37
CDC42P60953 SNORA16.2-201ENST00000390991 127 ntBASIC0.27□□□□□ -2.37
CDC42P60953 SNORA75.2-201ENST00000391138 150 ntBASIC0.27□□□□□ -2.37
CDC42P60953 SNORA75.3-201ENST00000391231 150 ntBASIC0.27□□□□□ -2.37
CDC42P60953 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CDC42P60953 RNU6-57P-201ENST00000411348 103 ntBASIC0.27□□□□□ -2.37
CDC42P60953 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42P60953 AC016909.1-201ENST00000415916 166 ntBASIC0.27□□□□□ -2.37
CDC42P60953 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.27□□□□□ -2.37
CDC42P60953 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.27□□□□□ -2.37
CDC42P60953 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42P60953 AC233266.1-201ENST00000454518 96 ntBASIC0.27□□□□□ -2.37
CDC42P60953 snoU13.6-201ENST00000458785 104 ntBASIC0.27□□□□□ -2.37
CDC42P60953 U7.7-201ENST00000459276 60 ntBASIC0.27□□□□□ -2.37
CDC42P60953 snoU109.3-201ENST00000459477 145 ntBASIC0.27□□□□□ -2.37
CDC42P60953 RNU7-57P-201ENST00000459540 60 ntBASIC0.27□□□□□ -2.37
CDC42P60953 RNU6-1220P-201ENST00000517126 108 ntBASIC0.27□□□□□ -2.37
CDC42P60953 SNORA25.17-201ENST00000517184 124 ntBASIC0.27□□□□□ -2.37
CDC42P60953 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42P60953 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42P60953 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42P60953 AC005771.1-201ENST00000585581 349 ntBASIC0.27□□□□□ -2.37
CDC42P60953 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.27□□□□□ -2.37
CDC42P60953 AC242852.1-201ENST00000612151 96 ntBASIC0.27□□□□□ -2.37
CDC42P60953 AC244015.1-201ENST00000622301 99 ntBASIC0.27□□□□□ -2.37
CDC42P60953 RNU6-501P-201ENST00000364072 100 ntBASIC0.26□□□□□ -2.37
CDC42P60953 RNU6-1305P-201ENST00000364353 104 ntBASIC0.26□□□□□ -2.37
CDC42P60953 RNU6-1335P-201ENST00000365426 107 ntBASIC0.26□□□□□ -2.37
CDC42P60953 SNORD99-201ENST00000408612 74 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AC008134.1-201ENST00000420943 193 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.26□□□□□ -2.37
CDC42P60953 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.26□□□□□ -2.37
CDC42P60953 AC005002.2-201ENST00000438228 269 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CDC42P60953 AC025465.4-201ENST00000513422 638 ntBASIC0.26□□□□□ -2.37
CDC42P60953 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AC025647.1-201ENST00000517879 253 ntBASIC0.26□□□□□ -2.37
CDC42P60953 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
CDC42P60953 MIR4999-201ENST00000585029 91 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AP000811.1-201ENST00000603803 651 ntBASIC0.26□□□□□ -2.37
CDC42P60953 RNU4-5P-201ENST00000607255 135 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AC093913.1-201ENST00000614178 329 ntBASIC0.26□□□□□ -2.37
CDC42P60953 AL049777.1-201ENST00000622740 518 ntBASIC0.26□□□□□ -2.37
CDC42P60953 RNU6-1240P-201ENST00000365155 104 ntBASIC0.25□□□□□ -2.37
CDC42P60953 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
CDC42P60953 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.25□□□□□ -2.37
CDC42P60953 RNU6-434P-201ENST00000384376 107 ntBASIC0.25□□□□□ -2.37
CDC42P60953 RNU6-393P-201ENST00000384475 107 ntBASIC0.25□□□□□ -2.37
CDC42P60953 RNU6-1237P-201ENST00000384777 107 ntBASIC0.25□□□□□ -2.37
CDC42P60953 AL365184.2-201ENST00000431139 435 ntBASIC0.25□□□□□ -2.37
CDC42P60953 AC245047.8-201ENST00000456455 284 ntBASIC0.25□□□□□ -2.37
CDC42P60953 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.25□□□□□ -2.37
CDC42P60953 RNU6-917P-201ENST00000516294 104 ntBASIC0.25□□□□□ -2.37
CDC42P60953 AP002001.1-203ENST00000534002 267 ntBASIC0.25□□□□□ -2.37
CDC42P60953 SUB1P2-201ENST00000556401 297 ntBASIC0.25□□□□□ -2.37
CDC42P60953 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.25□□□□□ -2.37
CDC42P60953 AC018714.1-201ENST00000605028 208 ntBASIC0.25□□□□□ -2.37
CDC42P60953 AL157392.4-201ENST00000609756 345 ntBASIC0.25□□□□□ -2.37
CDC42P60953 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.25□□□□□ -2.37
CDC42P60953 snoZ196.1-201ENST00000625269 89 ntBASIC0.25□□□□□ -2.37
CDC42P60953 MIR936-201ENST00000401264 98 ntBASIC0.24□□□□□ -2.37
CDC42P60953 RNU4-46P-201ENST00000410818 138 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42P60953 RPS26P42-201ENST00000413485 326 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AL354692.1-201ENST00000423044 315 ntBASIC0.24□□□□□ -2.37
CDC42P60953 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.24□□□□□ -2.37
CDC42P60953 AL596276.1-201ENST00000434465 418 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.24□□□□□ -2.37
CDC42P60953 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42P60953 RN7SKP12-201ENST00000516275 143 ntBASIC0.24□□□□□ -2.37
CDC42P60953 RNU6-405P-201ENST00000516637 110 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AC090572.1-201ENST00000519251 160 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AC022878.1-201ENST00000530684 149 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.24□□□□□ -2.37
CDC42P60953 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.24□□□□□ -2.37
CDC42P60953 MTND1P15-201ENST00000579262 949 ntBASIC0.24□□□□□ -2.37
CDC42P60953 RSL24D1P11-201ENST00000591045 491 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AP000907.4-201ENST00000604143 237 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AC068787.1-201ENST00000623908 691 ntBASIC0.24□□□□□ -2.37
CDC42P60953 AP000568.1-201ENST00000282964 442 ntBASIC0.23□□□□□ -2.37
CDC42P60953 Y_RNA.367-201ENST00000365544 101 ntBASIC0.23□□□□□ -2.37
CDC42P60953 SNORD89-201ENST00000390981 114 ntBASIC0.23□□□□□ -2.37
CDC42P60953 RNU1-119P-201ENST00000391122 165 ntBASIC0.23□□□□□ -2.37
CDC42P60953 AC004866.1-201ENST00000411748 78 ntBASIC0.23□□□□□ -2.37
CDC42P60953 MTCO2P12-201ENST00000427426 682 ntBASIC0.23□□□□□ -2.37
CDC42P60953 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.23□□□□□ -2.37
CDC42P60953 EPS15P1-201ENST00000448836 336 ntBASIC0.23□□□□□ -2.37
CDC42P60953 MTCO3P8-201ENST00000453691 755 ntBASIC0.23□□□□□ -2.37
CDC42P60953 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.23□□□□□ -2.37
CDC42P60953 LINC01399-202ENST00000458450 244 ntBASIC0.23□□□□□ -2.37
CDC42P60953 RNU6-221P-201ENST00000459541 99 ntBASIC0.23□□□□□ -2.37
CDC42P60953 RNU7-94P-201ENST00000459576 63 ntBASIC0.23□□□□□ -2.37
CDC42P60953 AC022493.2-201ENST00000506122 481 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms