Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 MIR586-201ENST00000385035 97 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 MIR549A-201ENST00000385268 96 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AC091133.4-201ENST00000511142 308 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 RNU6-1038P-201ENST00000516516 104 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.06□□□□□ -2.24
EIF3EP60228 MIR4709-201ENST00000577272 72 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AC073648.5-201ENST00000603502 305 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AC092747.3-201ENST00000603769 301 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AP000907.4-201ENST00000604143 237 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 MZT1P2-201ENST00000604387 248 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AC121247.2-201ENST00000604776 136 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AL365434.2-201ENST00000607979 234 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AC007684.1-201ENST00000609671 477 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 RMST_3.1-201ENST00000611651 109 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 AC040896.1-201ENST00000613819 479 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 MIR6715A-201ENST00000615929 79 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 FER-210ENST00000628534 558 ntTSL 5 BASIC1.06□□□□□ -2.24
EIF3EP60228 Y_RNA.123-201ENST00000363338 102 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 Y_RNA.378-201ENST00000365652 113 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 SNRPEP10-201ENST00000420249 274 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.05□□□□□ -2.24
EIF3EP60228 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.05□□□□□ -2.24
EIF3EP60228 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
EIF3EP60228 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.05□□□□□ -2.24
EIF3EP60228 AL157687.1-201ENST00000554853 619 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.05□□□□□ -2.24
EIF3EP60228 CPDP1-201ENST00000579660 283 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 AC004492.1-201ENST00000607036 742 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
EIF3EP60228 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
EIF3EP60228 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
EIF3EP60228 Y_RNA.167-201ENST00000363735 109 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 RNU4-20P-201ENST00000365601 151 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 RNY3P9-201ENST00000384727 106 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
EIF3EP60228 AC016909.1-201ENST00000415916 166 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.04□□□□□ -2.24
EIF3EP60228 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.04□□□□□ -2.24
EIF3EP60228 AL359672.1-201ENST00000442302 409 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.04□□□□□ -2.24
EIF3EP60228 RNU6-956P-201ENST00000458868 103 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 RPS3AP17-201ENST00000472594 777 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 RNU6-1146P-201ENST00000516282 102 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 AC024995.1-201ENST00000523014 93 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 Z99497.2-201ENST00000603634 310 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 AP001330.5-201ENST00000607176 411 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 AL357078.3-201ENST00000607528 618 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 AC017083.3-201ENST00000609955 700 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 AL121757.2-201ENST00000611223 313 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.04□□□□□ -2.24
EIF3EP60228 AC008873.1-201ENST00000625051 138 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 OR5AK4P-201ENST00000635912 903 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 MTND4P5-201ENST00000435821 1374 ntBASIC1.04□□□□□ -2.24
EIF3EP60228 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
EIF3EP60228 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
EIF3EP60228 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 RNU6-784P-201ENST00000384330 106 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 RNU6-417P-201ENST00000384712 107 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
EIF3EP60228 RNU6-325P-201ENST00000411132 105 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.03□□□□□ -2.24
EIF3EP60228 TIMM9P3-201ENST00000428659 274 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 RPS27P1-201ENST00000450552 247 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 BET1P1-201ENST00000482276 359 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 Y_RNA.654-201ENST00000497848 106 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 HMGN1P12-201ENST00000499125 195 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 AC092436.3-201ENST00000511788 257 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.03□□□□□ -2.24
EIF3EP60228 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.03□□□□□ -2.24
EIF3EP60228 BX284668.6-201ENST00000606899 438 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 AC006001.4-201ENST00000622243 395 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 SCARNA4-201ENST00000629045 128 ntBASIC1.03□□□□□ -2.24
EIF3EP60228 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
EIF3EP60228 RNU6-1305P-201ENST00000364353 104 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 Y_RNA.296-201ENST00000364930 108 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 RNA5SP467-201ENST00000391274 118 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 MIR450B-201ENST00000401182 78 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.02□□□□□ -2.25
EIF3EP60228 CDK8P2-201ENST00000415020 547 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.02□□□□□ -2.25
EIF3EP60228 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.02□□□□□ -2.25
EIF3EP60228 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.02□□□□□ -2.25
EIF3EP60228 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.02□□□□□ -2.25
EIF3EP60228 AC083798.1-201ENST00000472671 131 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.02□□□□□ -2.25
EIF3EP60228 RNA5SP401-201ENST00000515920 127 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 RN7SKP298-201ENST00000515950 94 ntBASIC1.02□□□□□ -2.25
EIF3EP60228 SNORA19.2-201ENST00000516013 114 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms