Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DEFB117-201ENST00000602356 141 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 AC006380.1-201ENST00000603598 186 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 Y_RNA.29-201ENST00000362570 113 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 Y_RNA.83-201ENST00000363005 113 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 Y_RNA.199-201ENST00000364014 102 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RNU6-1305P-201ENST00000364353 104 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 SNORA68.1-201ENST00000364537 132 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RNU6-662P-201ENST00000384253 104 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 SNORD15B-201ENST00000384714 146 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 MIR548B-201ENST00000385247 97 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RNA5SP171-201ENST00000391071 115 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 MIR1294-201ENST00000408503 142 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 Y_RNA.590-201ENST00000410140 107 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RNA5SP293-201ENST00000410527 113 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RNU4-47P-201ENST00000410876 114 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RNU2-61P-201ENST00000411069 191 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 PIGPP3-201ENST00000425307 415 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 AC005326.1-201ENST00000429197 123 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 AC090515.1-201ENST00000465295 476 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RPL27AP5-201ENST00000469428 449 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.78□□□□□ -1.96
CLRN1P58418 SCARNA3-201ENST00000517097 143 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 RNU6-586P-201ENST00000517265 104 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 MIR5680-201ENST00000577577 84 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 MIR4444-1-201ENST00000581696 74 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 MIR4444-2-201ENST00000584390 74 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 AC004832.5-201ENST00000608677 401 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 AC098479.1-201ENST00000609225 154 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 AC008873.1-201ENST00000625051 138 ntBASIC2.78□□□□□ -1.96
CLRN1P58418 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLRN1P58418 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLRN1P58418 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLRN1P58418 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
CLRN1P58418 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLRN1P58418 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLRN1P58418 SNORA71.3-201ENST00000362582 128 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 U3.8-201ENST00000363675 217 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 RNU6-324P-201ENST00000363957 106 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 RNA5SP267-201ENST00000364893 126 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 Y_RNA.292-201ENST00000364904 97 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 Y_RNA.329-201ENST00000365209 107 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLRN1P58418 MIR23A-201ENST00000385245 73 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.77□□□□□ -1.97
CLRN1P58418 TOMM22P2-201ENST00000430735 237 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 AL353705.1-201ENST00000433468 480 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 PRELID3BP1-201ENST00000457142 540 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 RPS27P29-201ENST00000463110 252 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.77□□□□□ -1.97
CLRN1P58418 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.77□□□□□ -1.97
CLRN1P58418 RNU6-191P-201ENST00000516295 94 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 Y_RNA.679-201ENST00000516416 91 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 AC068657.1-201ENST00000520807 306 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 AC245166.1-201ENST00000521012 253 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 MIR4282-201ENST00000583613 67 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 AC004792.1-201ENST00000614523 137 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 MIR7157-201ENST00000635801 60 ntBASIC2.77□□□□□ -1.97
CLRN1P58418 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.77□□□□□ -1.97
CLRN1P58418 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
CLRN1P58418 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.76□□□□□ -1.97
CLRN1P58418 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.76□□□□□ -1.97
CLRN1P58418 RNU6-545P-201ENST00000362681 104 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.82-201ENST00000363000 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.92-201ENST00000363043 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 SNORD46.1-201ENST00000364139 104 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.235-201ENST00000364412 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.306-201ENST00000365015 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.312-201ENST00000365089 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.322-201ENST00000365151 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 U6atac.2-201ENST00000408644 118 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 U3.40-201ENST00000408706 208 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.626-201ENST00000411288 95 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.76□□□□□ -1.97
CLRN1P58418 Z75741.1-201ENST00000446793 314 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 UQCRHP3-201ENST00000451503 251 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 AL138752.1-201ENST00000452964 351 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.650-201ENST00000459002 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 RPL7P49-201ENST00000471402 708 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 AC083906.5-201ENST00000503722 328 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
CLRN1P58418 RNU6-436P-201ENST00000516171 114 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.777-201ENST00000516982 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 AC105245.1-201ENST00000581934 244 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.771-201ENST00000598668 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 AC005828.6-201ENST00000606610 232 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 Y_RNA.789-201ENST00000622480 102 ntBASIC2.76□□□□□ -1.97
CLRN1P58418 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.76□□□□□ -1.97
CLRN1P58418 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.76□□□□□ -1.97
CLRN1P58418 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLRN1P58418 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.75□□□□□ -1.97
CLRN1P58418 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLRN1P58418 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.75□□□□□ -1.97
CLRN1P58418 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CLRN1P58418 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLRN1P58418 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLRN1P58418 MIR411-201ENST00000362239 96 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms