Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
CLDN12P56749 MTATP6P3-201ENST00000581686 676 ntBASIC0.48□□□□□ -2.33
CLDN12P56749 AC068790.2-201ENST00000602601 557 ntBASIC0.48□□□□□ -2.33
CLDN12P56749 AC012557.2-201ENST00000605919 418 ntBASIC0.48□□□□□ -2.33
CLDN12P56749 AC002044.1-201ENST00000606707 158 ntBASIC0.48□□□□□ -2.33
CLDN12P56749 AP001596.2-201ENST00000608410 312 ntBASIC0.48□□□□□ -2.33
CLDN12P56749 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.48□□□□□ -2.33
CLDN12P56749 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CLDN12P56749 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CLDN12P56749 RNU6-199P-201ENST00000362954 107 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU6-1240P-201ENST00000365155 104 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CLDN12P56749 RNU6-1029P-201ENST00000384109 107 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU6-17P-201ENST00000384245 107 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU6-18P-201ENST00000384527 107 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU6-1127P-201ENST00000384580 107 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 MIR499A-201ENST00000384903 122 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 SNORD41-201ENST00000386967 70 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 SNORA16.2-201ENST00000390991 127 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AL451046.2-201ENST00000403074 277 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AL354692.1-201ENST00000423044 315 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AC245047.3-201ENST00000429428 127 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU7-21P-201ENST00000459430 62 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU7-57P-201ENST00000459540 60 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU7-94P-201ENST00000459576 63 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AC007215.1-201ENST00000464893 276 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.47□□□□□ -2.33
CLDN12P56749 FABP5P5-201ENST00000515537 406 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 Y_RNA.676-201ENST00000516393 96 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU6-1069P-201ENST00000516612 133 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.47□□□□□ -2.33
CLDN12P56749 AC133485.1-201ENST00000567176 124 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AC138907.6-201ENST00000568401 126 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.47□□□□□ -2.33
CLDN12P56749 MTND1P15-201ENST00000579262 949 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AC025449.1-201ENST00000603896 529 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 SNRPGP20-201ENST00000604477 205 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 AC008873.1-201ENST00000625051 138 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 snoZ196.1-201ENST00000625269 89 ntBASIC0.47□□□□□ -2.33
CLDN12P56749 RNU5F-7P-201ENST00000363696 115 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 Y_RNA.224-201ENST00000364308 111 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 TIMM9P3-201ENST00000428659 274 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 RNU6-221P-201ENST00000459541 99 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 AC113410.1-201ENST00000505029 247 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 HMGB1P29-201ENST00000505659 499 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 AC025647.1-201ENST00000517879 253 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 MIR4703-201ENST00000577728 79 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 SNORA28-201ENST00000606769 126 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 TUSC7.1-201ENST00000610969 165 ntBASIC0.46□□□□□ -2.34
CLDN12P56749 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CLDN12P56749 SNORA2.2-201ENST00000365473 135 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 MIR320B2-201ENST00000408479 138 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 MIR548J-201ENST00000408833 112 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 RNU6-57P-201ENST00000411348 103 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.45□□□□□ -2.34
CLDN12P56749 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.45□□□□□ -2.34
CLDN12P56749 CETN4P-201ENST00000432407 469 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.45□□□□□ -2.34
CLDN12P56749 SNRPFP3-201ENST00000457792 225 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.45□□□□□ -2.34
CLDN12P56749 BET1P1-201ENST00000482276 359 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 AC006566.1-201ENST00000608943 513 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 AL603839.4-201ENST00000624658 1005 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 ELL2P3-201ENST00000457883 1602 ntBASIC0.45□□□□□ -2.34
CLDN12P56749 RNU5B-2P-201ENST00000363036 113 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 RNU6-1305P-201ENST00000364353 104 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 RNU4-12P-201ENST00000365233 139 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 RNU4-48P-201ENST00000365559 182 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CLDN12P56749 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CLDN12P56749 AC016909.1-201ENST00000415916 166 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.44□□□□□ -2.34
CLDN12P56749 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.44□□□□□ -2.34
CLDN12P56749 MTCO2P7-201ENST00000446518 666 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CLDN12P56749 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.44□□□□□ -2.34
CLDN12P56749 AGGF1P4-201ENST00000568249 801 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 BNIP3P39-201ENST00000601077 554 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 AP000907.4-201ENST00000604143 237 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 PRELID3BP2-201ENST00000605362 201 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 MIR6788-201ENST00000618842 66 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 AC068792.1-201ENST00000621354 417 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 AC106754.2-201ENST00000623006 233 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 AL078596.1-201ENST00000624856 447 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.44□□□□□ -2.34
CLDN12P56749 AC007671.2-201ENST00000637344 619 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 AC027514.1-201ENST00000588561 1603 ntBASIC0.44□□□□□ -2.34
CLDN12P56749 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
CLDN12P56749 RNU6-227P-201ENST00000362865 103 ntBASIC0.43□□□□□ -2.34
CLDN12P56749 MIR513B-201ENST00000385136 84 ntBASIC0.43□□□□□ -2.34
CLDN12P56749 AC106883.1-201ENST00000418805 562 ntBASIC0.43□□□□□ -2.34
CLDN12P56749 RPEP5-201ENST00000441137 268 ntBASIC0.43□□□□□ -2.34
CLDN12P56749 UBE2D3P4-201ENST00000441973 436 ntBASIC0.43□□□□□ -2.34
CLDN12P56749 snoU13.6-201ENST00000458785 104 ntBASIC0.43□□□□□ -2.34
CLDN12P56749 SCARNA18-201ENST00000459004 134 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms