Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC022080.3-201ENST00000544433 482 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.61□□□□□ -1.99
SUMO3P55854 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SUMO3P55854 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.61□□□□□ -1.99
SUMO3P55854 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SUMO3P55854 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SUMO3P55854 AC008264.2-201ENST00000610193 3731 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 SNORD87-201ENST00000364849 89 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 Y_RNA.332-201ENST00000365271 113 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 SNORA11.1-201ENST00000408133 129 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 EEF1A1P41-201ENST00000414667 207 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 AC074290.1-201ENST00000448883 135 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 HMGN2P9-201ENST00000476875 229 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 AC010655.3-201ENST00000478818 450 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
SUMO3P55854 RNU6-408P-201ENST00000515910 100 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 PRELID2P1-201ENST00000552837 301 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 AL161756.2-201ENST00000604597 246 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 AC011476.5-201ENST00000615594 130 ntBASIC2.6□□□□□ -1.99
SUMO3P55854 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.6□□□□□ -1.99
SUMO3P55854 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SUMO3P55854 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SUMO3P55854 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.59□□□□□ -1.99
SUMO3P55854 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 MIR410-201ENST00000362222 80 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 Y_RNA.183-201ENST00000363882 113 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RNU6-1310P-201ENST00000384153 107 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 snosnR66.1-201ENST00000391095 99 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 AL079342.1-201ENST00000401460 267 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RN7SKP123-201ENST00000410732 291 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RNU6-130P-201ENST00000411112 103 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 AC123900.1-201ENST00000420390 96 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RPL23AP83-201ENST00000434984 473 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.59□□□□□ -1.99
SUMO3P55854 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.59□□□□□ -1.99
SUMO3P55854 PRELID3BP1-201ENST00000457142 540 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RNU6-625P-201ENST00000459412 107 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RN7SL283P-201ENST00000489055 303 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RNU6-991P-201ENST00000516168 107 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RNU6-897P-201ENST00000517135 105 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.59□□□□□ -1.99
SUMO3P55854 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.59□□□□□ -1.99
SUMO3P55854 AK6P2-201ENST00000549020 471 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 RAC1P9-201ENST00000604990 392 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.59□□□□□ -1.99
SUMO3P55854 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.59□□□□□ -1.99
SUMO3P55854 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SUMO3P55854 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
SUMO3P55854 AC108206.1-201ENST00000570186 4159 ntBASIC2.58□□□□□ -2
SUMO3P55854 RNU6-626P-201ENST00000363354 107 ntBASIC2.58□□□□□ -2
SUMO3P55854 RNU6-961P-201ENST00000363893 105 ntBASIC2.58□□□□□ -2
SUMO3P55854 Y_RNA.210-201ENST00000364161 110 ntBASIC2.58□□□□□ -2
SUMO3P55854 RNU6-1264P-201ENST00000383891 107 ntBASIC2.58□□□□□ -2
SUMO3P55854 Y_RNA.462-201ENST00000384268 102 ntBASIC2.58□□□□□ -2
SUMO3P55854 RNU6-975P-201ENST00000384296 105 ntBASIC2.58□□□□□ -2
SUMO3P55854 SNORA44-201ENST00000384584 132 ntBASIC2.58□□□□□ -2
SUMO3P55854 MIR548B-201ENST00000385247 97 ntBASIC2.58□□□□□ -2
SUMO3P55854 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.58□□□□□ -2
SUMO3P55854 EDDM3CP-201ENST00000415977 425 ntBASIC2.58□□□□□ -2
SUMO3P55854 AL358176.2-201ENST00000425769 204 ntBASIC2.58□□□□□ -2
SUMO3P55854 MRPS35P2-201ENST00000508242 191 ntBASIC2.58□□□□□ -2
SUMO3P55854 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
SUMO3P55854 AL117187.1-201ENST00000555482 181 ntBASIC2.58□□□□□ -2
SUMO3P55854 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.58□□□□□ -2
SUMO3P55854 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SUMO3P55854 MIR3605-201ENST00000583214 100 ntBASIC2.58□□□□□ -2
SUMO3P55854 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
SUMO3P55854 PRR13P7-201ENST00000605538 430 ntBASIC2.58□□□□□ -2
SUMO3P55854 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
SUMO3P55854 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SUMO3P55854 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SUMO3P55854 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SUMO3P55854 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
SUMO3P55854 AC009487.4-201ENST00000624969 3585 ntBASIC2.57□□□□□ -2
SUMO3P55854 Y_RNA.214-201ENST00000364201 112 ntBASIC2.57□□□□□ -2
SUMO3P55854 Y_RNA.230-201ENST00000364348 109 ntBASIC2.57□□□□□ -2
SUMO3P55854 RNU1-148P-201ENST00000384472 162 ntBASIC2.57□□□□□ -2
SUMO3P55854 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.57□□□□□ -2
SUMO3P55854 RAB28P5-201ENST00000427490 651 ntBASIC2.57□□□□□ -2
SUMO3P55854 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
SUMO3P55854 RPS29P26-201ENST00000477483 171 ntBASIC2.57□□□□□ -2
SUMO3P55854 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.57□□□□□ -2
SUMO3P55854 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.57□□□□□ -2
SUMO3P55854 RNU6-1143P-201ENST00000516125 104 ntBASIC2.57□□□□□ -2
SUMO3P55854 RNU6-948P-201ENST00000516374 107 ntBASIC2.57□□□□□ -2
SUMO3P55854 SNORA74D-201ENST00000516404 141 ntBASIC2.57□□□□□ -2
SUMO3P55854 RNU6-1046P-201ENST00000516538 107 ntBASIC2.57□□□□□ -2
SUMO3P55854 RNU6-107P-201ENST00000516643 102 ntBASIC2.57□□□□□ -2
SUMO3P55854 SNORA40.15-201ENST00000516884 107 ntBASIC2.57□□□□□ -2
SUMO3P55854 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.57□□□□□ -2
SUMO3P55854 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.57□□□□□ -2
SUMO3P55854 RNU6-770P-201ENST00000363929 105 ntBASIC2.56□□□□□ -2
SUMO3P55854 RNU6-20P-201ENST00000384106 107 ntBASIC2.56□□□□□ -2
SUMO3P55854 SNORD63-201ENST00000384262 68 ntBASIC2.56□□□□□ -2
SUMO3P55854 MIR483-201ENST00000385070 76 ntBASIC2.56□□□□□ -2
SUMO3P55854 RNU6-1109P-201ENST00000391187 107 ntBASIC2.56□□□□□ -2
SUMO3P55854 MIR548F4-201ENST00000408515 105 ntBASIC2.56□□□□□ -2
SUMO3P55854 RNA5SP475-201ENST00000410568 110 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms