Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC010615.1-201ENST00000594254 1764 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
PKNOX1P55347 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
PKNOX1P55347 Y_RNA.67-201ENST00000362870 100 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 Y_RNA.151-201ENST00000363566 112 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 RNU6-1090P-201ENST00000364065 94 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 RNU6-1019P-201ENST00000364424 107 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 RNU6-975P-201ENST00000384296 105 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 RNU6-95P-201ENST00000384697 107 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 RNU6-174P-201ENST00000410406 106 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 OOSP1P1-201ENST00000423265 274 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.32□□□□□ -2.2
PKNOX1P55347 MTCO3P18-201ENST00000440206 761 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 AC245517.4-201ENST00000448601 281 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 NFU1P2-201ENST00000448700 469 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 MTND1P11-201ENST00000456661 876 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.32□□□□□ -2.2
PKNOX1P55347 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.32□□□□□ -2.2
PKNOX1P55347 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.32□□□□□ -2.2
PKNOX1P55347 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.32□□□□□ -2.2
PKNOX1P55347 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.32□□□□□ -2.2
PKNOX1P55347 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.32□□□□□ -2.2
PKNOX1P55347 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.32□□□□□ -2.2
PKNOX1P55347 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 AL158827.2-201ENST00000602494 330 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.32□□□□□ -2.2
PKNOX1P55347 AC095038.3-201ENST00000634439 195 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 AL691447.3-201ENST00000635020 330 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 MIR338-201ENST00000636369 67 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 MIR1321-201ENST00000637766 79 ntBASIC1.32□□□□□ -2.2
PKNOX1P55347 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PKNOX1P55347 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PKNOX1P55347 ZNF72P-201ENST00000425869 1908 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 MIR302D-201ENST00000362275 68 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 SNORA33-201ENST00000363664 130 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 SNORA67.2-201ENST00000384300 149 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 Y_RNA.517-201ENST00000384551 106 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 RNU6-1235P-201ENST00000384559 107 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 RNU1-78P-201ENST00000391248 165 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
PKNOX1P55347 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.31□□□□□ -2.2
PKNOX1P55347 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
PKNOX1P55347 MTCO2P7-201ENST00000446518 666 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 RNU6-498P-201ENST00000459468 107 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 RNU6-506P-201ENST00000516553 94 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 PRR13P7-201ENST00000605538 430 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 AC080013.6-201ENST00000606185 215 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 AL138726.1-201ENST00000614873 333 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
PKNOX1P55347 AC099654.12-201ENST00000639868 649 ntBASIC1.31□□□□□ -2.2
PKNOX1P55347 Y_RNA.135-201ENST00000363439 95 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PKNOX1P55347 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PKNOX1P55347 RNU6-360P-201ENST00000390944 104 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 AL590002.1-201ENST00000406554 418 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 CST2P1-201ENST00000425770 87 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 FTH1P12-201ENST00000432137 551 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 JTBP1-201ENST00000441314 247 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 AC245505.1-201ENST00000556398 224 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.3□□□□□ -2.2
PKNOX1P55347 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.3□□□□□ -2.2
PKNOX1P55347 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.3□□□□□ -2.2
PKNOX1P55347 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
PKNOX1P55347 MTND4P5-201ENST00000435821 1374 ntBASIC1.3□□□□□ -2.2
PKNOX1P55347 ZNF204P-201ENST00000416749 2397 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 RNU6-271P-201ENST00000363858 105 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 MIR586-201ENST00000385035 97 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 RNU6-332P-201ENST00000391193 108 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 RNA5SP504-201ENST00000410676 117 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 AL161935.2-201ENST00000414627 60 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 AC016907.1-201ENST00000419483 435 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 Z82188.1-201ENST00000436709 154 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 MTATP6P26-201ENST00000445926 662 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 HMGN1P13-201ENST00000505795 138 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 RNU6-948P-201ENST00000516374 107 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.29□□□□□ -2.2
PKNOX1P55347 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 MIR3672-201ENST00000584290 82 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 AC023043.2-201ENST00000589678 1026 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 AL359697.1-201ENST00000624879 587 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 AC008873.1-201ENST00000625051 138 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 AC024614.3-201ENST00000637860 256 ntBASIC1.29□□□□□ -2.2
PKNOX1P55347 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
PKNOX1P55347 snoU2-30.2-201ENST00000362805 70 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 RNU6-1305P-201ENST00000364353 104 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 RNU6-790P-201ENST00000384479 105 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 Y_RNA.530-201ENST00000384587 101 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 RNU2-7P-201ENST00000410794 178 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 EBAG9P1-201ENST00000418955 543 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.28□□□□□ -2.2
PKNOX1P55347 Z82205.1-201ENST00000428456 297 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms