Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC010099.1-201ENST00000455434 375 ntBASIC2.54□□□□□ -2
FOXG1P55316 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.54□□□□□ -2
FOXG1P55316 Y_RNA.641-201ENST00000459414 105 ntBASIC2.54□□□□□ -2
FOXG1P55316 AL049873.1-201ENST00000480540 376 ntBASIC2.54□□□□□ -2
FOXG1P55316 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
FOXG1P55316 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.54□□□□□ -2
FOXG1P55316 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.54□□□□□ -2
FOXG1P55316 U2.21-201ENST00000637295 81 ntBASIC2.54□□□□□ -2
FOXG1P55316 AL365361.1-201ENST00000566942 3481 ntBASIC2.54□□□□□ -2
FOXG1P55316 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
FOXG1P55316 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.54□□□□□ -2
FOXG1P55316 AC093010.3-201ENST00000570269 15214 ntBASIC2.54□□□□□ -2
FOXG1P55316 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.53□□□□□ -2
FOXG1P55316 Y_RNA.101-201ENST00000363154 102 ntBASIC2.53□□□□□ -2
FOXG1P55316 RNU6-873P-201ENST00000363833 107 ntBASIC2.53□□□□□ -2
FOXG1P55316 SNORA80A-201ENST00000363922 136 ntBASIC2.53□□□□□ -2
FOXG1P55316 Y_RNA.272-201ENST00000364696 102 ntBASIC2.53□□□□□ -2
FOXG1P55316 RNU6-818P-201ENST00000364837 108 ntBASIC2.53□□□□□ -2
FOXG1P55316 RNU1-100P-201ENST00000365255 165 ntBASIC2.53□□□□□ -2
FOXG1P55316 RNU6-959P-201ENST00000384671 107 ntBASIC2.53□□□□□ -2
FOXG1P55316 FTH1P15-201ENST00000406984 280 ntBASIC2.53□□□□□ -2
FOXG1P55316 AL357139.1-201ENST00000407792 426 ntBASIC2.53□□□□□ -2
FOXG1P55316 RNU6-735P-201ENST00000410612 107 ntBASIC2.53□□□□□ -2
FOXG1P55316 COTL1P1-201ENST00000422309 375 ntBASIC2.53□□□□□ -2
FOXG1P55316 AL358075.3-201ENST00000426289 226 ntBASIC2.53□□□□□ -2
FOXG1P55316 RPS15AP5-201ENST00000436276 388 ntBASIC2.53□□□□□ -2
FOXG1P55316 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.53□□□□□ -2
FOXG1P55316 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
FOXG1P55316 AC097462.2-201ENST00000504623 481 ntBASIC2.53□□□□□ -2
FOXG1P55316 MIR5571-201ENST00000577998 113 ntBASIC2.53□□□□□ -2
FOXG1P55316 LARP7P3-201ENST00000579888 337 ntBASIC2.53□□□□□ -2
FOXG1P55316 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.53□□□□□ -2
FOXG1P55316 AC019159.1-201ENST00000605094 187 ntBASIC2.53□□□□□ -2
FOXG1P55316 AC022441.3-201ENST00000605737 136 ntBASIC2.53□□□□□ -2
FOXG1P55316 AC091895.1-201ENST00000624494 256 ntBASIC2.53□□□□□ -2
FOXG1P55316 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
FOXG1P55316 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.53□□□□□ -2
FOXG1P55316 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
FOXG1P55316 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.53□□□□□ -2
FOXG1P55316 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
FOXG1P55316 AL035425.3-201ENST00000564206 4996 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXG1P55316 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXG1P55316 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXG1P55316 Y_RNA.81-201ENST00000362997 102 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RNU6-653P-201ENST00000363074 106 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RNU6-884P-201ENST00000363889 107 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 SNORA72.2-201ENST00000365028 127 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 CD24P4-201ENST00000382840 243 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RNU1-73P-201ENST00000383971 164 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RNU6-1027P-201ENST00000383998 107 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
FOXG1P55316 Y_RNA.580-201ENST00000391004 95 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 Y_RNA.595-201ENST00000410403 105 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AC107083.1-201ENST00000439643 279 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AL714022.1-201ENST00000439897 151 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXG1P55316 AC005042.3-201ENST00000453230 174 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 MTATP6P7-201ENST00000453315 681 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXG1P55316 RNU7-23P-201ENST00000459465 62 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AC083906.5-201ENST00000503722 328 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RNA5SP272-201ENST00000516095 111 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RN7SKP43-201ENST00000516173 320 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RNU6-191P-201ENST00000516295 94 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 RNU6-928P-201ENST00000516876 104 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AP005660.1-201ENST00000522972 293 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXG1P55316 AP000867.2-201ENST00000532468 320 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AL138963.2-201ENST00000605137 226 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AC010999.1-201ENST00000611856 324 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 AC073308.1-201ENST00000623696 305 ntBASIC2.52□□□□□ -2.01
FOXG1P55316 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXG1P55316 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXG1P55316 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXG1P55316 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.51□□□□□ -2.01
FOXG1P55316 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
FOXG1P55316 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.51□□□□□ -2.01
FOXG1P55316 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.51□□□□□ -2.01
FOXG1P55316 RNU6-137P-201ENST00000363680 108 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 SNORA9.2-201ENST00000365361 133 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 SNORA22C-201ENST00000384614 134 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 Y_RNA.571-201ENST00000384753 98 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 MIR23A-201ENST00000385245 73 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 RNU6-1154P-201ENST00000391001 104 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 RNU2-2P-201ENST00000410396 191 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 AC099548.1-201ENST00000421443 426 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 RPL23AP58-201ENST00000440453 469 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 RPS29P20-201ENST00000489592 171 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.51□□□□□ -2.01
FOXG1P55316 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXG1P55316 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.51□□□□□ -2.01
FOXG1P55316 RNU5F-8P-201ENST00000515941 111 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 RNU6-581P-201ENST00000516214 105 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 RNU6-62P-201ENST00000516526 102 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 RNU6-1198P-201ENST00000516904 67 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 SNORA31.23-201ENST00000517219 133 ntBASIC2.51□□□□□ -2.01
FOXG1P55316 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms