Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-975P-201ENST00000384296 105 ntBASIC1.12□□□□□ -2.23
CDH6P55285 TIMM9P3-201ENST00000428659 274 ntBASIC1.12□□□□□ -2.23
CDH6P55285 USP9YP14-201ENST00000430663 563 ntBASIC1.12□□□□□ -2.23
CDH6P55285 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH6P55285 MTCO1P19-201ENST00000443487 500 ntBASIC1.12□□□□□ -2.23
CDH6P55285 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
CDH6P55285 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
CDH6P55285 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.12□□□□□ -2.23
CDH6P55285 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
CDH6P55285 AC108729.3-201ENST00000513484 108 ntBASIC1.12□□□□□ -2.23
CDH6P55285 SNORA19.2-201ENST00000516013 114 ntBASIC1.12□□□□□ -2.23
CDH6P55285 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH6P55285 AL512310.8-201ENST00000550183 120 ntBASIC1.12□□□□□ -2.23
CDH6P55285 MTND3P12-201ENST00000559068 328 ntBASIC1.12□□□□□ -2.23
CDH6P55285 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.12□□□□□ -2.23
CDH6P55285 Z99497.2-201ENST00000603634 310 ntBASIC1.12□□□□□ -2.23
CDH6P55285 AP000907.4-201ENST00000604143 237 ntBASIC1.12□□□□□ -2.23
CDH6P55285 AC139792.3-201ENST00000623525 224 ntBASIC1.12□□□□□ -2.23
CDH6P55285 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CDH6P55285 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CDH6P55285 RNA5SP327-201ENST00000362494 101 ntBASIC1.11□□□□□ -2.23
CDH6P55285 snoU2-30.2-201ENST00000362805 70 ntBASIC1.11□□□□□ -2.23
CDH6P55285 RNU6-392P-201ENST00000364926 101 ntBASIC1.11□□□□□ -2.23
CDH6P55285 SNORA4.2-201ENST00000365313 147 ntBASIC1.11□□□□□ -2.23
CDH6P55285 Y_RNA.359-201ENST00000365498 102 ntBASIC1.11□□□□□ -2.23
CDH6P55285 RNU4-20P-201ENST00000365601 151 ntBASIC1.11□□□□□ -2.23
CDH6P55285 Y_RNA.553-201ENST00000384670 102 ntBASIC1.11□□□□□ -2.23
CDH6P55285 MIR513A1-201ENST00000385138 129 ntBASIC1.11□□□□□ -2.23
CDH6P55285 AC004866.1-201ENST00000411748 78 ntBASIC1.11□□□□□ -2.23
CDH6P55285 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH6P55285 RPL23AP36-201ENST00000413895 458 ntBASIC1.11□□□□□ -2.23
CDH6P55285 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH6P55285 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH6P55285 AC074290.1-201ENST00000448883 135 ntBASIC1.11□□□□□ -2.23
CDH6P55285 MTCO3P8-201ENST00000453691 755 ntBASIC1.11□□□□□ -2.23
CDH6P55285 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.11□□□□□ -2.23
CDH6P55285 SCOCP1-201ENST00000554676 349 ntBASIC1.11□□□□□ -2.23
CDH6P55285 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
CDH6P55285 MIR5692C1-201ENST00000585309 91 ntBASIC1.11□□□□□ -2.23
CDH6P55285 AC040896.1-201ENST00000613819 479 ntBASIC1.11□□□□□ -2.23
CDH6P55285 MIR8065-201ENST00000620577 100 ntBASIC1.11□□□□□ -2.23
CDH6P55285 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
CDH6P55285 RNU6-82P-201ENST00000363970 107 ntBASIC1.1□□□□□ -2.23
CDH6P55285 RNU6-38P-201ENST00000384085 107 ntBASIC1.1□□□□□ -2.23
CDH6P55285 SNORD116-8-201ENST00000384365 95 ntBASIC1.1□□□□□ -2.23
CDH6P55285 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.1□□□□□ -2.23
CDH6P55285 SNRPEP10-201ENST00000420249 274 ntBASIC1.1□□□□□ -2.23
CDH6P55285 MRPS10P2-201ENST00000431226 381 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH6P55285 MTND1P26-201ENST00000440488 538 ntBASIC1.1□□□□□ -2.23
CDH6P55285 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC009237.7-201ENST00000447357 229 ntBASIC1.1□□□□□ -2.23
CDH6P55285 NFU1P2-201ENST00000448700 469 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.1□□□□□ -2.23
CDH6P55285 SRRM1P2-201ENST00000464531 1192 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
CDH6P55285 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.1□□□□□ -2.23
CDH6P55285 AL157687.1-201ENST00000554853 619 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.1□□□□□ -2.23
CDH6P55285 AC006362.1-201ENST00000567392 174 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
CDH6P55285 AC016727.1-205ENST00000605437 569 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AL365434.2-201ENST00000607979 234 ntBASIC1.1□□□□□ -2.23
CDH6P55285 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.1□□□□□ -2.23
CDH6P55285 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC006001.4-201ENST00000622243 395 ntBASIC1.1□□□□□ -2.23
CDH6P55285 AC009033.1-201ENST00000624279 431 ntBASIC1.1□□□□□ -2.23
CDH6P55285 ELL2P3-201ENST00000457883 1602 ntBASIC1.1□□□□□ -2.23
CDH6P55285 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CDH6P55285 RNU6-53P-201ENST00000365367 106 ntBASIC1.09□□□□□ -2.23
CDH6P55285 Y_RNA.409-201ENST00000383990 98 ntBASIC1.09□□□□□ -2.23
CDH6P55285 RNY3P9-201ENST00000384727 106 ntBASIC1.09□□□□□ -2.23
CDH6P55285 MIR521-1-201ENST00000384902 87 ntBASIC1.09□□□□□ -2.23
CDH6P55285 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CDH6P55285 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CDH6P55285 RNU6-325P-201ENST00000411132 105 ntBASIC1.09□□□□□ -2.23
CDH6P55285 CDK8P2-201ENST00000415020 547 ntBASIC1.09□□□□□ -2.23
CDH6P55285 HMGN2P34-201ENST00000437647 269 ntBASIC1.09□□□□□ -2.23
CDH6P55285 AL359672.1-201ENST00000442302 409 ntBASIC1.09□□□□□ -2.23
CDH6P55285 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH6P55285 RNU7-34P-201ENST00000459394 64 ntBASIC1.09□□□□□ -2.23
CDH6P55285 AF186996.7-201ENST00000492781 209 ntBASIC1.09□□□□□ -2.23
CDH6P55285 Y_RNA.654-201ENST00000497848 106 ntBASIC1.09□□□□□ -2.23
CDH6P55285 HMGN1P12-201ENST00000499125 195 ntBASIC1.09□□□□□ -2.23
CDH6P55285 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.09□□□□□ -2.23
CDH6P55285 AC010424.1-201ENST00000506336 297 ntBASIC1.09□□□□□ -2.23
CDH6P55285 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH6P55285 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
CDH6P55285 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CDH6P55285 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.09□□□□□ -2.23
CDH6P55285 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
CDH6P55285 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.09□□□□□ -2.23
CDH6P55285 MZT1P2-201ENST00000604387 248 ntBASIC1.09□□□□□ -2.23
CDH6P55285 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH6P55285 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
CDH6P55285 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.09□□□□□ -2.23
CDH6P55285 AC092807.2-201ENST00000609367 243 ntBASIC1.09□□□□□ -2.23
CDH6P55285 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.09□□□□□ -2.23
CDH6P55285 OR5AK4P-201ENST00000635912 903 ntBASIC1.09□□□□□ -2.23
CDH6P55285 AC099654.5-201ENST00000636479 350 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms