Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PVT1_3.1-201ENST00000620853 95 ntBASIC1.77□□□□□ -2.13
VCPP55072 AC009033.1-201ENST00000624279 431 ntBASIC1.77□□□□□ -2.13
VCPP55072 Y_RNA.36-201ENST00000362602 112 ntBASIC1.76□□□□□ -2.13
VCPP55072 RNU6-562P-201ENST00000362731 107 ntBASIC1.76□□□□□ -2.13
VCPP55072 Y_RNA.135-201ENST00000363439 95 ntBASIC1.76□□□□□ -2.13
VCPP55072 Y_RNA.151-201ENST00000363566 112 ntBASIC1.76□□□□□ -2.13
VCPP55072 RNU6-1286P-201ENST00000383871 107 ntBASIC1.76□□□□□ -2.13
VCPP55072 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VCPP55072 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.76□□□□□ -2.13
VCPP55072 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.76□□□□□ -2.13
VCPP55072 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.76□□□□□ -2.13
VCPP55072 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.76□□□□□ -2.13
VCPP55072 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.76□□□□□ -2.13
VCPP55072 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.76□□□□□ -2.13
VCPP55072 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
VCPP55072 MRPS36P4-201ENST00000534436 298 ntBASIC1.76□□□□□ -2.13
VCPP55072 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.76□□□□□ -2.13
VCPP55072 MIR4285-201ENST00000581001 85 ntBASIC1.76□□□□□ -2.13
VCPP55072 FGF7P1-201ENST00000582820 288 ntBASIC1.76□□□□□ -2.13
VCPP55072 MIR3976-201ENST00000606807 139 ntBASIC1.76□□□□□ -2.13
VCPP55072 AC009994.1-201ENST00000606889 253 ntBASIC1.76□□□□□ -2.13
VCPP55072 AC007014.2-201ENST00000615581 479 ntBASIC1.76□□□□□ -2.13
VCPP55072 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.76□□□□□ -2.13
VCPP55072 AC002553.4-201ENST00000616896 331 ntBASIC1.76□□□□□ -2.13
VCPP55072 U1.36-201ENST00000620684 176 ntBASIC1.76□□□□□ -2.13
VCPP55072 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VCPP55072 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VCPP55072 RNU5B-2P-201ENST00000363036 113 ntBASIC1.75□□□□□ -2.13
VCPP55072 Y_RNA.99-201ENST00000363138 105 ntBASIC1.75□□□□□ -2.13
VCPP55072 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
VCPP55072 Y_RNA.212-201ENST00000364177 102 ntBASIC1.75□□□□□ -2.13
VCPP55072 RNU6-1164P-201ENST00000364428 107 ntBASIC1.75□□□□□ -2.13
VCPP55072 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.75□□□□□ -2.13
VCPP55072 RNU6-784P-201ENST00000384330 106 ntBASIC1.75□□□□□ -2.13
VCPP55072 RNU6-1093P-201ENST00000391194 107 ntBASIC1.75□□□□□ -2.13
VCPP55072 AL357139.1-201ENST00000407792 426 ntBASIC1.75□□□□□ -2.13
VCPP55072 RNA5SP501-201ENST00000410990 112 ntBASIC1.75□□□□□ -2.13
VCPP55072 RNU2-41P-201ENST00000410991 178 ntBASIC1.75□□□□□ -2.13
VCPP55072 RNU6-1148P-201ENST00000410992 104 ntBASIC1.75□□□□□ -2.13
VCPP55072 RPS4XP11-201ENST00000446897 772 ntBASIC1.75□□□□□ -2.13
VCPP55072 HMGN2P18-201ENST00000450680 270 ntBASIC1.75□□□□□ -2.13
VCPP55072 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.75□□□□□ -2.13
VCPP55072 snoU13.6-201ENST00000458785 104 ntBASIC1.75□□□□□ -2.13
VCPP55072 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
VCPP55072 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.75□□□□□ -2.13
VCPP55072 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.75□□□□□ -2.13
VCPP55072 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.75□□□□□ -2.13
VCPP55072 MIR3942-201ENST00000585264 109 ntBASIC1.75□□□□□ -2.13
VCPP55072 AC136443.5-201ENST00000603741 370 ntBASIC1.75□□□□□ -2.13
VCPP55072 AL022345.1-201ENST00000607292 135 ntBASIC1.75□□□□□ -2.13
VCPP55072 MIR6515-201ENST00000619843 57 ntBASIC1.75□□□□□ -2.13
VCPP55072 RNU1-58P-201ENST00000362413 163 ntBASIC1.74□□□□□ -2.13
VCPP55072 SNORA7.1-201ENST00000363750 139 ntBASIC1.74□□□□□ -2.13
VCPP55072 SNORD116-11-201ENST00000383882 92 ntBASIC1.74□□□□□ -2.13
VCPP55072 RNU6-968P-201ENST00000384076 107 ntBASIC1.74□□□□□ -2.13
VCPP55072 RNU6-790P-201ENST00000384479 105 ntBASIC1.74□□□□□ -2.13
VCPP55072 RNU6-831P-201ENST00000384548 107 ntBASIC1.74□□□□□ -2.13
VCPP55072 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VCPP55072 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VCPP55072 RNA5SP494-201ENST00000410653 129 ntBASIC1.74□□□□□ -2.13
VCPP55072 RPS20P15-201ENST00000412792 311 ntBASIC1.74□□□□□ -2.13
VCPP55072 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
VCPP55072 PCMTD1P1-201ENST00000455560 355 ntBASIC1.74□□□□□ -2.13
VCPP55072 AC005741.1-201ENST00000511094 432 ntBASIC1.74□□□□□ -2.13
VCPP55072 RNU6-864P-201ENST00000516256 108 ntBASIC1.74□□□□□ -2.13
VCPP55072 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.74□□□□□ -2.13
VCPP55072 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.74□□□□□ -2.13
VCPP55072 AC010928.2-201ENST00000588017 287 ntBASIC1.74□□□□□ -2.13
VCPP55072 CYP2C61P-201ENST00000604072 290 ntBASIC1.74□□□□□ -2.13
VCPP55072 AC006504.8-201ENST00000621046 635 ntBASIC1.74□□□□□ -2.13
VCPP55072 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
VCPP55072 Y_RNA.178-201ENST00000363832 102 ntBASIC1.73□□□□□ -2.13
VCPP55072 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VCPP55072 POLR2J4-204ENST00000418424 324 ntBASIC1.73□□□□□ -2.13
VCPP55072 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.73□□□□□ -2.13
VCPP55072 AL353572.1-201ENST00000442490 417 ntBASIC1.73□□□□□ -2.13
VCPP55072 ATP5J2P3-201ENST00000451550 258 ntBASIC1.73□□□□□ -2.13
VCPP55072 AC130509.1-201ENST00000464158 433 ntBASIC1.73□□□□□ -2.13
VCPP55072 AC027575.1-201ENST00000481064 460 ntBASIC1.73□□□□□ -2.13
VCPP55072 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.73□□□□□ -2.13
VCPP55072 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.73□□□□□ -2.13
VCPP55072 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.73□□□□□ -2.13
VCPP55072 AC090517.1-201ENST00000569307 266 ntBASIC1.73□□□□□ -2.13
VCPP55072 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.73□□□□□ -2.13
VCPP55072 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
VCPP55072 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.73□□□□□ -2.13
VCPP55072 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VCPP55072 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
VCPP55072 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
VCPP55072 SNORA32.2-201ENST00000384049 122 ntBASIC1.72□□□□□ -2.13
VCPP55072 MIR934-201ENST00000401241 83 ntBASIC1.72□□□□□ -2.13
VCPP55072 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.72□□□□□ -2.13
VCPP55072 AC009310.1-201ENST00000414414 451 ntBASIC1.72□□□□□ -2.13
VCPP55072 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.72□□□□□ -2.13
VCPP55072 AC082651.2-201ENST00000496833 166 ntBASIC1.72□□□□□ -2.13
VCPP55072 RNU6-1098P-201ENST00000516772 96 ntBASIC1.72□□□□□ -2.13
VCPP55072 RNU6-273P-201ENST00000516937 96 ntBASIC1.72□□□□□ -2.13
VCPP55072 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.72□□□□□ -2.13
VCPP55072 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
VCPP55072 RPL17P51-201ENST00000605218 238 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms