Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
ACLYP53396 AC211469.2-201ENST00000605461 205 ntBASIC1.17□□□□□ -2.22
ACLYP53396 MIR338-201ENST00000636369 67 ntBASIC1.17□□□□□ -2.22
ACLYP53396 SNORA72.2-201ENST00000365028 127 ntBASIC1.16□□□□□ -2.22
ACLYP53396 MIR194-1-201ENST00000384892 85 ntBASIC1.16□□□□□ -2.22
ACLYP53396 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.16□□□□□ -2.22
ACLYP53396 AC073910.1-201ENST00000445047 438 ntBASIC1.16□□□□□ -2.22
ACLYP53396 MTCO2P18-201ENST00000457151 658 ntBASIC1.16□□□□□ -2.22
ACLYP53396 AC025465.4-201ENST00000513422 638 ntBASIC1.16□□□□□ -2.22
ACLYP53396 AC010493.1-201ENST00000513479 292 ntBASIC1.16□□□□□ -2.22
ACLYP53396 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.16□□□□□ -2.22
ACLYP53396 RN7SKP49-201ENST00000516675 260 ntBASIC1.16□□□□□ -2.22
ACLYP53396 RAB11AP2-201ENST00000545905 639 ntBASIC1.16□□□□□ -2.22
ACLYP53396 MIR5000-201ENST00000577717 103 ntBASIC1.16□□□□□ -2.22
ACLYP53396 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
ACLYP53396 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.16□□□□□ -2.22
ACLYP53396 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ACLYP53396 SNORA29-201ENST00000384183 140 ntBASIC1.15□□□□□ -2.23
ACLYP53396 RNU6-348P-201ENST00000384386 107 ntBASIC1.15□□□□□ -2.23
ACLYP53396 RNU6-1235P-201ENST00000384559 107 ntBASIC1.15□□□□□ -2.23
ACLYP53396 RPS26P42-201ENST00000413485 326 ntBASIC1.15□□□□□ -2.23
ACLYP53396 COX6CP10-201ENST00000416832 224 ntBASIC1.15□□□□□ -2.23
ACLYP53396 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.15□□□□□ -2.23
ACLYP53396 MTND3P9-201ENST00000429526 346 ntBASIC1.15□□□□□ -2.23
ACLYP53396 AC073464.1-201ENST00000429823 534 ntBASIC1.15□□□□□ -2.23
ACLYP53396 USP9YP14-201ENST00000430663 563 ntBASIC1.15□□□□□ -2.23
ACLYP53396 AC004386.2-201ENST00000441858 148 ntBASIC1.15□□□□□ -2.23
ACLYP53396 RNU6-498P-201ENST00000459468 107 ntBASIC1.15□□□□□ -2.23
ACLYP53396 AC114982.1-201ENST00000469402 321 ntBASIC1.15□□□□□ -2.23
ACLYP53396 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.15□□□□□ -2.23
ACLYP53396 AC145350.1-201ENST00000567426 208 ntBASIC1.15□□□□□ -2.23
ACLYP53396 MIR5006-201ENST00000583027 110 ntBASIC1.15□□□□□ -2.23
ACLYP53396 MIR4424-201ENST00000585257 86 ntBASIC1.15□□□□□ -2.23
ACLYP53396 AC104458.1-201ENST00000608243 463 ntBASIC1.15□□□□□ -2.23
ACLYP53396 TCL6_2.1-201ENST00000615162 119 ntBASIC1.15□□□□□ -2.23
ACLYP53396 RNU5B-2P-201ENST00000363036 113 ntBASIC1.14□□□□□ -2.23
ACLYP53396 RNA5SP494-201ENST00000410653 129 ntBASIC1.14□□□□□ -2.23
ACLYP53396 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.14□□□□□ -2.23
ACLYP53396 U8.21-201ENST00000459536 136 ntBASIC1.14□□□□□ -2.23
ACLYP53396 RNU6-189P-201ENST00000516120 101 ntBASIC1.14□□□□□ -2.23
ACLYP53396 RNU6-948P-201ENST00000516374 107 ntBASIC1.14□□□□□ -2.23
ACLYP53396 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.14□□□□□ -2.23
ACLYP53396 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.14□□□□□ -2.23
ACLYP53396 MIR4709-201ENST00000577272 72 ntBASIC1.14□□□□□ -2.23
ACLYP53396 MIR4528-201ENST00000577763 90 ntBASIC1.14□□□□□ -2.23
ACLYP53396 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
ACLYP53396 AL391646.1-201ENST00000603860 190 ntBASIC1.14□□□□□ -2.23
ACLYP53396 AL354950.2-201ENST00000617939 290 ntBASIC1.14□□□□□ -2.23
ACLYP53396 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ACLYP53396 snoU2-30.2-201ENST00000362805 70 ntBASIC1.13□□□□□ -2.23
ACLYP53396 RNU6-534P-201ENST00000364877 106 ntBASIC1.13□□□□□ -2.23
ACLYP53396 SNORA4.2-201ENST00000365313 147 ntBASIC1.13□□□□□ -2.23
ACLYP53396 RNU6-1286P-201ENST00000383871 107 ntBASIC1.13□□□□□ -2.23
ACLYP53396 RNU6-1103P-201ENST00000384150 107 ntBASIC1.13□□□□□ -2.23
ACLYP53396 RNU6-975P-201ENST00000384296 105 ntBASIC1.13□□□□□ -2.23
ACLYP53396 MIR515-2-201ENST00000384883 83 ntBASIC1.13□□□□□ -2.23
ACLYP53396 MIR515-1-201ENST00000384884 83 ntBASIC1.13□□□□□ -2.23
ACLYP53396 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ACLYP53396 AC009237.7-201ENST00000447357 229 ntBASIC1.13□□□□□ -2.23
ACLYP53396 NFU1P2-201ENST00000448700 469 ntBASIC1.13□□□□□ -2.23
ACLYP53396 AC016717.1-201ENST00000448918 286 ntBASIC1.13□□□□□ -2.23
ACLYP53396 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.13□□□□□ -2.23
ACLYP53396 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.13□□□□□ -2.23
ACLYP53396 RRN3P3-201ENST00000549207 578 ntBASIC1.13□□□□□ -2.23
ACLYP53396 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.13□□□□□ -2.23
ACLYP53396 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
ACLYP53396 MIR3973-201ENST00000579824 107 ntBASIC1.13□□□□□ -2.23
ACLYP53396 AC064836.2-201ENST00000609491 462 ntBASIC1.13□□□□□ -2.23
ACLYP53396 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ACLYP53396 SNORA33-201ENST00000363664 130 ntBASIC1.12□□□□□ -2.23
ACLYP53396 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
ACLYP53396 Y_RNA.393-201ENST00000383936 102 ntBASIC1.12□□□□□ -2.23
ACLYP53396 RNU6-1158P-201ENST00000391167 107 ntBASIC1.12□□□□□ -2.23
ACLYP53396 RNU1-139P-201ENST00000391307 165 ntBASIC1.12□□□□□ -2.23
ACLYP53396 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
ACLYP53396 SNX2P2-201ENST00000424553 323 ntBASIC1.12□□□□□ -2.23
ACLYP53396 MTCO2P19-201ENST00000427513 598 ntBASIC1.12□□□□□ -2.23
ACLYP53396 HMGN2P34-201ENST00000437647 269 ntBASIC1.12□□□□□ -2.23
ACLYP53396 USP9YP29-201ENST00000445112 563 ntBASIC1.12□□□□□ -2.23
ACLYP53396 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.12□□□□□ -2.23
ACLYP53396 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.12□□□□□ -2.23
ACLYP53396 RNU7-34P-201ENST00000459394 64 ntBASIC1.12□□□□□ -2.23
ACLYP53396 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
ACLYP53396 Y_RNA.717-201ENST00000517106 92 ntBASIC1.12□□□□□ -2.23
ACLYP53396 AC087854.1-201ENST00000519706 414 ntBASIC1.12□□□□□ -2.23
ACLYP53396 AC104576.1-201ENST00000524225 88 ntBASIC1.12□□□□□ -2.23
ACLYP53396 AC087683.1-201ENST00000591187 441 ntBASIC1.12□□□□□ -2.23
ACLYP53396 AC087752.4-201ENST00000605911 462 ntBASIC1.12□□□□□ -2.23
ACLYP53396 AL365434.2-201ENST00000607979 234 ntBASIC1.12□□□□□ -2.23
ACLYP53396 AC073114.1-201ENST00000612027 490 ntBASIC1.12□□□□□ -2.23
ACLYP53396 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.12□□□□□ -2.23
ACLYP53396 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
ACLYP53396 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
ACLYP53396 RNU6-1317P-201ENST00000364582 104 ntBASIC1.11□□□□□ -2.23
ACLYP53396 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
ACLYP53396 MIR513A1-201ENST00000385138 129 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AC004866.1-201ENST00000411748 78 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.11□□□□□ -2.23
ACLYP53396 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.11□□□□□ -2.23
ACLYP53396 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms