Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 LINC01399-202ENST00000458450 244 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 HSPE1P23-201ENST00000509838 286 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 RNU6-917P-201ENST00000516294 104 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 AL512605.2-201ENST00000592972 256 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 AC068792.1-201ENST00000621354 417 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 AL049777.1-201ENST00000622740 518 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 AC022418.1-201ENST00000624118 445 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.25□□□□□ -2.37
NKX2-5P52952 AL442644.1-201ENST00000454390 3105 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 SNORA20.2-201ENST00000383922 131 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 MTCO2P7-201ENST00000446518 666 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 AL031313.1-201ENST00000448435 256 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.24□□□□□ -2.37
NKX2-5P52952 RNU7-94P-201ENST00000459576 63 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.24□□□□□ -2.37
NKX2-5P52952 SCARNA24.1-201ENST00000516465 137 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 AL137100.2-201ENST00000555786 315 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 AC011155.2-201ENST00000623202 216 ntBASIC0.24□□□□□ -2.37
NKX2-5P52952 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.24□□□□□ -2.37
NKX2-5P52952 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
NKX2-5P52952 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 RNU1-119P-201ENST00000391122 165 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.23□□□□□ -2.37
NKX2-5P52952 AC016909.1-201ENST00000415916 166 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 snoU13.6-201ENST00000458785 104 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 AC025647.1-201ENST00000517879 253 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 AC106038.2-201ENST00000520706 568 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 AC027419.1-201ENST00000522976 328 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 MIR5000-201ENST00000577717 103 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.23□□□□□ -2.37
NKX2-5P52952 7SK.10-201ENST00000621414 298 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 AC009878.1-201ENST00000621819 340 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 AC243829.3-201ENST00000622177 108 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 snoZ196.1-201ENST00000625269 89 ntBASIC0.23□□□□□ -2.37
NKX2-5P52952 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
NKX2-5P52952 RNU6-1067P-201ENST00000384752 107 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 RNU6-1242P-201ENST00000391052 103 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 RNU6-1186P-201ENST00000410429 97 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 AL445305.1-201ENST00000432577 575 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 Y_RNA.672-201ENST00000516289 104 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 RNU6-1110P-201ENST00000516462 101 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 AP000907.4-201ENST00000604143 237 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 AC138749.5-201ENST00000611461 208 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 AL391903.3-201ENST00000612158 163 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 AL078595.3-201ENST00000623815 1166 ntBASIC0.22□□□□□ -2.37
NKX2-5P52952 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.22□□□□□ -2.37
NKX2-5P52952 Y_RNA.224-201ENST00000364308 111 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 RNY1P8-201ENST00000383970 114 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 RNU6-434P-201ENST00000384376 107 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 RNU6-393P-201ENST00000384475 107 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 MIR499A-201ENST00000384903 122 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 RPS3AP3-201ENST00000411933 242 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC106883.1-201ENST00000418805 562 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.21□□□□□ -2.38
NKX2-5P52952 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.21□□□□□ -2.38
NKX2-5P52952 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.21□□□□□ -2.38
NKX2-5P52952 MTCO2P6-201ENST00000463134 685 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.21□□□□□ -2.38
NKX2-5P52952 SNORA25.17-201ENST00000517184 124 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.21□□□□□ -2.38
NKX2-5P52952 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.21□□□□□ -2.38
NKX2-5P52952 PCMTD1P2-201ENST00000565017 355 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.21□□□□□ -2.38
NKX2-5P52952 RSL24D1P11-201ENST00000591045 491 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC004832.4-201ENST00000608952 331 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AL136317.1-201ENST00000612653 226 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC093913.1-201ENST00000614178 329 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC009159.2-201ENST00000617603 606 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AL078596.1-201ENST00000624856 447 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 AC004808.1-201ENST00000627671 721 ntBASIC0.21□□□□□ -2.38
NKX2-5P52952 RNU6-793P-201ENST00000384233 104 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 RNA5SP504-201ENST00000410676 117 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 RNA5SP247-201ENST00000411181 105 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 RPS26P42-201ENST00000413485 326 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.2□□□□□ -2.38
NKX2-5P52952 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.2□□□□□ -2.38
NKX2-5P52952 RPL23AP50-201ENST00000434149 455 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.2□□□□□ -2.38
NKX2-5P52952 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.2□□□□□ -2.38
NKX2-5P52952 STAG3L5P-204ENST00000443759 179 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 RNU6-221P-201ENST00000459541 99 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 RNU6-405P-201ENST00000516637 110 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 RNU6-467P-201ENST00000517027 110 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.2□□□□□ -2.38
NKX2-5P52952 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.2□□□□□ -2.38
NKX2-5P52952 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.2□□□□□ -2.38
NKX2-5P52952 AC234772.3-201ENST00000602277 528 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 AC243829.6-201ENST00000612652 106 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
NKX2-5P52952 AC027514.1-201ENST00000588561 1603 ntBASIC0.2□□□□□ -2.38
NKX2-5P52952 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
NKX2-5P52952 RNU6-501P-201ENST00000364072 100 ntBASIC0.19□□□□□ -2.38
NKX2-5P52952 RNU1-133P-201ENST00000364867 167 ntBASIC0.19□□□□□ -2.38
NKX2-5P52952 Y_RNA.330-201ENST00000365230 109 ntBASIC0.19□□□□□ -2.38
NKX2-5P52952 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms