Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.67□□□□□ -2.14
SMSP52788 Y_RNA.89-201ENST00000363031 102 ntBASIC1.67□□□□□ -2.14
SMSP52788 SNORD116-11-201ENST00000383882 92 ntBASIC1.67□□□□□ -2.14
SMSP52788 RNU6-296P-201ENST00000384608 107 ntBASIC1.67□□□□□ -2.14
SMSP52788 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
SMSP52788 MIR320B2-201ENST00000408479 138 ntBASIC1.67□□□□□ -2.14
SMSP52788 AL358453.1-201ENST00000422522 250 ntBASIC1.67□□□□□ -2.14
SMSP52788 AL513185.2-201ENST00000425543 193 ntBASIC1.67□□□□□ -2.14
SMSP52788 HSPE1P21-201ENST00000438283 308 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC091435.1-201ENST00000505442 584 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC107393.1-201ENST00000512403 346 ntBASIC1.67□□□□□ -2.14
SMSP52788 RNU6-948P-201ENST00000516374 107 ntBASIC1.67□□□□□ -2.14
SMSP52788 RNA5SP54-201ENST00000516951 92 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.67□□□□□ -2.14
SMSP52788 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
SMSP52788 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
SMSP52788 MIR4753-201ENST00000585119 83 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC012557.2-201ENST00000605919 418 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC083806.3-201ENST00000614016 455 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC009033.1-201ENST00000624279 431 ntBASIC1.67□□□□□ -2.14
SMSP52788 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.67□□□□□ -2.14
SMSP52788 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SMSP52788 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.66□□□□□ -2.14
SMSP52788 RNU6-1252P-201ENST00000363054 104 ntBASIC1.66□□□□□ -2.14
SMSP52788 Y_RNA.157-201ENST00000363638 102 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU6-137P-201ENST00000363680 108 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU4-9P-201ENST00000364951 139 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU6-975P-201ENST00000384296 105 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU6-790P-201ENST00000384479 105 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU6-1235P-201ENST00000384559 107 ntBASIC1.66□□□□□ -2.14
SMSP52788 MIR586-201ENST00000385035 97 ntBASIC1.66□□□□□ -2.14
SMSP52788 SNORA67.5-201ENST00000391036 107 ntBASIC1.66□□□□□ -2.14
SMSP52788 MIR1287-201ENST00000408492 90 ntBASIC1.66□□□□□ -2.14
SMSP52788 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.66□□□□□ -2.14
SMSP52788 AL589823.1-201ENST00000429577 183 ntBASIC1.66□□□□□ -2.14
SMSP52788 C8orf59P1-201ENST00000429930 303 ntBASIC1.66□□□□□ -2.14
SMSP52788 AC099677.2-201ENST00000436385 175 ntBASIC1.66□□□□□ -2.14
SMSP52788 NFU1P2-201ENST00000448700 469 ntBASIC1.66□□□□□ -2.14
SMSP52788 MTCO3P8-201ENST00000453691 755 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU6-498P-201ENST00000459468 107 ntBASIC1.66□□□□□ -2.14
SMSP52788 AC114982.1-201ENST00000469402 321 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU6-344P-201ENST00000516635 111 ntBASIC1.66□□□□□ -2.14
SMSP52788 RNU6-1198P-201ENST00000516904 67 ntBASIC1.66□□□□□ -2.14
SMSP52788 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
SMSP52788 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
SMSP52788 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.66□□□□□ -2.14
SMSP52788 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
SMSP52788 RRN3P3-201ENST00000549207 578 ntBASIC1.66□□□□□ -2.14
SMSP52788 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
SMSP52788 MIR5094-201ENST00000578766 85 ntBASIC1.66□□□□□ -2.14
SMSP52788 POLR3GP2-201ENST00000588366 668 ntBASIC1.66□□□□□ -2.14
SMSP52788 MIR502-201ENST00000606349 86 ntBASIC1.66□□□□□ -2.14
SMSP52788 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.66□□□□□ -2.14
SMSP52788 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SMSP52788 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SMSP52788 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
SMSP52788 RNY1P10-201ENST00000363268 113 ntBASIC1.65□□□□□ -2.15
SMSP52788 RNU6-534P-201ENST00000364877 106 ntBASIC1.65□□□□□ -2.15
SMSP52788 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
SMSP52788 RNU6-877P-201ENST00000383868 107 ntBASIC1.65□□□□□ -2.15
SMSP52788 RNU6-245P-201ENST00000384020 107 ntBASIC1.65□□□□□ -2.15
SMSP52788 Y_RNA.516-201ENST00000384541 124 ntBASIC1.65□□□□□ -2.15
SMSP52788 MIR517A-201ENST00000385001 87 ntBASIC1.65□□□□□ -2.15
SMSP52788 AL117342.1-201ENST00000404861 406 ntBASIC1.65□□□□□ -2.15
SMSP52788 AC004866.1-201ENST00000411748 78 ntBASIC1.65□□□□□ -2.15
SMSP52788 AL590632.1-201ENST00000424289 371 ntBASIC1.65□□□□□ -2.15
SMSP52788 MTND1P34-201ENST00000438556 671 ntBASIC1.65□□□□□ -2.15
SMSP52788 AC092473.1-201ENST00000441098 221 ntBASIC1.65□□□□□ -2.15
SMSP52788 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.65□□□□□ -2.15
SMSP52788 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
SMSP52788 RNU6-864P-201ENST00000516256 108 ntBASIC1.65□□□□□ -2.15
SMSP52788 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.65□□□□□ -2.15
SMSP52788 AC069114.2-201ENST00000604699 304 ntBASIC1.65□□□□□ -2.15
SMSP52788 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.65□□□□□ -2.15
SMSP52788 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.65□□□□□ -2.15
SMSP52788 AC090617.10-201ENST00000624308 134 ntBASIC1.65□□□□□ -2.15
SMSP52788 AC008873.1-201ENST00000625051 138 ntBASIC1.65□□□□□ -2.15
SMSP52788 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
SMSP52788 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SMSP52788 RNU6-1019P-201ENST00000364424 107 ntBASIC1.64□□□□□ -2.15
SMSP52788 RNU6-596P-201ENST00000365395 98 ntBASIC1.64□□□□□ -2.15
SMSP52788 RNU6-418P-201ENST00000384035 107 ntBASIC1.64□□□□□ -2.15
SMSP52788 SNORA67.2-201ENST00000384300 149 ntBASIC1.64□□□□□ -2.15
SMSP52788 AC009161.1-201ENST00000417306 376 ntBASIC1.64□□□□□ -2.15
SMSP52788 AC060773.1-201ENST00000421698 310 ntBASIC1.64□□□□□ -2.15
SMSP52788 UBE2V1P8-201ENST00000437166 265 ntBASIC1.64□□□□□ -2.15
SMSP52788 HMGN2P9-201ENST00000476875 229 ntBASIC1.64□□□□□ -2.15
SMSP52788 MTCYBP18-201ENST00000501056 747 ntBASIC1.64□□□□□ -2.15
SMSP52788 ACA59.1-201ENST00000515966 143 ntBASIC1.64□□□□□ -2.15
SMSP52788 RNU6-1314P-201ENST00000517139 104 ntBASIC1.64□□□□□ -2.15
SMSP52788 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
SMSP52788 AC124303.1-201ENST00000605703 360 ntBASIC1.64□□□□□ -2.15
SMSP52788 AC090517.2-201ENST00000614966 680 ntBASIC1.64□□□□□ -2.15
SMSP52788 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.64□□□□□ -2.15
SMSP52788 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.64□□□□□ -2.15
SMSP52788 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SMSP52788 RNU6-862P-201ENST00000362804 105 ntBASIC1.63□□□□□ -2.15
SMSP52788 RNU6-457P-201ENST00000363999 107 ntBASIC1.63□□□□□ -2.15
SMSP52788 RNU4-12P-201ENST00000365233 139 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms