Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNU1-115P-201ENST00000365329 160 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 RNU6-541P-201ENST00000384709 110 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CLCNKAP51800 SNORA69.1-201ENST00000390904 137 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 Y_RNA.592-201ENST00000410274 109 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 RN7SKP192-201ENST00000411291 327 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCNKAP51800 USP9YP16-201ENST00000430287 407 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCNKAP51800 USP9YP23-201ENST00000455085 407 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 CKS1BP2-201ENST00000497342 240 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 ANXA2P1-201ENST00000505539 926 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 RNU6-58P-201ENST00000517143 103 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 RNU6-988P-201ENST00000519081 107 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 DEFB131C-201ENST00000528817 165 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 CBX3P7-201ENST00000532876 502 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 CYCSP26-201ENST00000534107 320 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 EIF4A1P12-201ENST00000551910 141 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 AC016925.2-201ENST00000605108 242 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 SNORD58B-201ENST00000607313 66 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 AC013412.1-201ENST00000610687 192 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.28□□□□□ -2.04
CLCNKAP51800 AC083806.3-201ENST00000614016 455 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 MIR5739-201ENST00000619803 80 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 MIR4272-201ENST00000635924 64 ntBASIC2.28□□□□□ -2.04
CLCNKAP51800 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLCNKAP51800 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
CLCNKAP51800 ZNF204P-201ENST00000416749 2397 ntBASIC2.28□□□□□ -2.05
CLCNKAP51800 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLCNKAP51800 RNU1-23P-201ENST00000363361 144 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 SNORD32B-201ENST00000364460 84 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 RNU1-51P-201ENST00000365345 176 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 RNA5SP240-201ENST00000365355 128 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 Y_RNA.557-201ENST00000384680 107 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 SNORA3.2-201ENST00000408221 125 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 RPS15AP28-201ENST00000435088 386 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCNKAP51800 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCNKAP51800 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCNKAP51800 MIR449C-201ENST00000516047 92 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCNKAP51800 AC006600.1-201ENST00000572529 153 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 AC090617.3-201ENST00000573670 475 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 MIR5695-201ENST00000579717 85 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 AC022432.1-201ENST00000595739 310 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.27□□□□□ -2.05
CLCNKAP51800 AC012640.5-201ENST00000623897 319 ntBASIC2.27□□□□□ -2.05
CLCNKAP51800 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLCNKAP51800 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLCNKAP51800 Y_RNA.39-201ENST00000362620 98 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 SNORD115-8-201ENST00000363856 82 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 Y_RNA.202-201ENST00000364083 110 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 SNORA3A-201ENST00000364113 130 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 SNORD115-38-201ENST00000365037 82 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 MIR10B-201ENST00000385011 110 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 RNU6-159P-201ENST00000391080 106 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 SNORD23.1-201ENST00000408212 104 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.26□□□□□ -2.05
CLCNKAP51800 AC027124.2-201ENST00000428249 105 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 AL161788.1-201ENST00000441805 169 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 RNU6-1114P-201ENST00000516022 107 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLCNKAP51800 AC144568.1-201ENST00000520139 137 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.26□□□□□ -2.05
CLCNKAP51800 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.26□□□□□ -2.05
CLCNKAP51800 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.26□□□□□ -2.05
CLCNKAP51800 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.26□□□□□ -2.05
CLCNKAP51800 AC090517.1-201ENST00000569307 266 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.26□□□□□ -2.05
CLCNKAP51800 U2.1-201ENST00000618978 145 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 AL606534.2-204ENST00000635008 178 ntBASIC2.26□□□□□ -2.05
CLCNKAP51800 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLCNKAP51800 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLCNKAP51800 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLCNKAP51800 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
CLCNKAP51800 RNU6-873P-201ENST00000363833 107 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 RNU1-91P-201ENST00000364746 163 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 SNORA33.2-201ENST00000365413 134 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 SNORA18.2-201ENST00000383865 132 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 RNU6-708P-201ENST00000384217 107 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 RNU1-139P-201ENST00000391307 165 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AL355497.1-201ENST00000406262 551 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AC114482.1-201ENST00000418010 247 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 Z98742.3-201ENST00000418637 326 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AC018634.1-201ENST00000437554 401 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.25□□□□□ -2.05
CLCNKAP51800 CYP2C59P-201ENST00000457790 269 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AC007215.1-201ENST00000464893 276 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 RNU6-965P-201ENST00000516721 96 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 AC022868.1-201ENST00000517767 391 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 MIR1273D-201ENST00000577266 86 ntBASIC2.25□□□□□ -2.05
CLCNKAP51800 MIR5188-201ENST00000583467 113 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms