Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 SCARNA16.3-201ENST00000516595 184 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 AL590705.4-201ENST00000532209 134 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.39□□□□□ -2.03
CLCN3P51790 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 MIR6132-201ENST00000622083 109 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 AC090517.3-201ENST00000625170 141 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
CLCN3P51790 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLCN3P51790 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLCN3P51790 AC233981.2-201ENST00000611524 1614 ntBASIC2.39□□□□□ -2.03
CLCN3P51790 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCN3P51790 SNORD115-32-201ENST00000364079 82 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 RNU6-1105P-201ENST00000384774 107 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.38□□□□□ -2.03
CLCN3P51790 Z82188.1-201ENST00000436709 154 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCN3P51790 RN7SKP210-201ENST00000459176 261 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 RPL23AP75-201ENST00000491601 451 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 AF186996.7-201ENST00000492781 209 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 RNU6-911P-201ENST00000516523 104 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 SNORA40.14-201ENST00000516543 86 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 RNU7-4P-201ENST00000516961 62 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 AL117187.1-201ENST00000555482 181 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 MIR5188-201ENST00000583467 113 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 AC008737.2-201ENST00000599446 118 ntBASIC2.38□□□□□ -2.03
CLCN3P51790 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLCN3P51790 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLCN3P51790 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCN3P51790 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CLCN3P51790 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLCN3P51790 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCN3P51790 AC091812.1-201ENST00000432235 1948 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 SNORD114-1-201ENST00000362705 72 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 Y_RNA.106-201ENST00000363189 100 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 Y_RNA.153-201ENST00000363615 91 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 SNORA38-201ENST00000363946 132 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 RNU4-9P-201ENST00000364951 139 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 RNU1-138P-201ENST00000384093 164 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 Y_RNA.485-201ENST00000384395 102 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 RNA5SP213-201ENST00000391031 106 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 MTCO3P29-201ENST00000432119 779 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCN3P51790 MTND3P2-201ENST00000438452 342 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCN3P51790 AC132942.1-201ENST00000486753 483 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 AC145146.1-201ENST00000496370 254 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 AC093852.1-201ENST00000503587 266 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 AC021146.2-201ENST00000504736 556 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCN3P51790 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.37□□□□□ -2.03
CLCN3P51790 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCN3P51790 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 AC113195.1-201ENST00000579952 141 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 AL162373.1-201ENST00000620433 407 ntBASIC2.37□□□□□ -2.03
CLCN3P51790 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.37□□□□□ -2.03
CLCN3P51790 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.37□□□□□ -2.03
CLCN3P51790 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLCN3P51790 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CLCN3P51790 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CLCN3P51790 Y_RNA.39-201ENST00000362620 98 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 SNORD32B-201ENST00000364460 84 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 Y_RNA.455-201ENST00000384230 98 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 RNU6-17P-201ENST00000384245 107 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 RNU6-18P-201ENST00000384527 107 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 RNU6-823P-201ENST00000391042 103 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 SNORA46.1-201ENST00000391069 153 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 Y_RNA.592-201ENST00000410274 109 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 HMGN2P3-201ENST00000433603 273 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 HMGN2P5-201ENST00000436882 273 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.36□□□□□ -2.03
CLCN3P51790 U8.20-201ENST00000459445 131 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 RNU6-764P-201ENST00000516396 105 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 RPL17P51-201ENST00000605218 238 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 MIR1244-1-201ENST00000612829 85 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 PCGEM1.1-201ENST00000613431 131 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 MIR7843-201ENST00000622274 79 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 AL078596.1-201ENST00000624856 447 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 MIR1244-3-201ENST00000635744 85 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 MIR1244-2-201ENST00000636449 85 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 MIR1244-4-202ENST00000636813 85 ntBASIC2.36□□□□□ -2.03
CLCN3P51790 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CLCN3P51790 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLCN3P51790 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.35□□□□□ -2.03
CLCN3P51790 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLCN3P51790 U3.9-201ENST00000363823 204 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 Y_RNA.314-201ENST00000365114 102 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 Y_RNA.405-201ENST00000383979 100 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 Y_RNA.451-201ENST00000384200 100 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 SNORA36A-201ENST00000384221 132 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 U8.10-201ENST00000384260 133 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 Y_RNA.524-201ENST00000384564 100 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 Y_RNA.527-201ENST00000384573 102 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 Y_RNA.561-201ENST00000384694 100 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 MIR625-201ENST00000385047 85 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 MIR190B-201ENST00000401119 79 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 Y_RNA.597-201ENST00000410463 100 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms