Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK3P49761 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.9□□□□□ -1.95
CLK3P49761 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.9□□□□□ -1.95
CLK3P49761 AL365265.1-201ENST00000621045 234 ntBASIC2.9□□□□□ -1.95
CLK3P49761 AC002064.3-201ENST00000623448 346 ntBASIC2.9□□□□□ -1.95
CLK3P49761 AC018692.3-201ENST00000623929 123 ntBASIC2.9□□□□□ -1.95
CLK3P49761 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CLK3P49761 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.89□□□□□ -1.95
CLK3P49761 RNU5F-3P-201ENST00000363767 117 ntBASIC2.89□□□□□ -1.95
CLK3P49761 RNU1-140P-201ENST00000365040 165 ntBASIC2.89□□□□□ -1.95
CLK3P49761 MIR487A-201ENST00000385009 80 ntBASIC2.89□□□□□ -1.95
CLK3P49761 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
CLK3P49761 Y_RNA.595-201ENST00000410403 105 ntBASIC2.89□□□□□ -1.95
CLK3P49761 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.89□□□□□ -1.95
CLK3P49761 OOSP1P1-201ENST00000423265 274 ntBASIC2.89□□□□□ -1.95
CLK3P49761 RPL23AP58-201ENST00000440453 469 ntBASIC2.89□□□□□ -1.95
CLK3P49761 AP004217.1-201ENST00000480579 346 ntBASIC2.89□□□□□ -1.95
CLK3P49761 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.89□□□□□ -1.95
CLK3P49761 RNA5SP54-201ENST00000516951 92 ntBASIC2.89□□□□□ -1.95
CLK3P49761 CYCSP23-201ENST00000519781 313 ntBASIC2.89□□□□□ -1.95
CLK3P49761 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.89□□□□□ -1.95
CLK3P49761 AC233702.2-202ENST00000562547 291 ntBASIC2.89□□□□□ -1.95
CLK3P49761 MIR5692C2-201ENST00000577959 77 ntBASIC2.89□□□□□ -1.95
CLK3P49761 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
CLK3P49761 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
CLK3P49761 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
CLK3P49761 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLK3P49761 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.89□□□□□ -1.95
CLK3P49761 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CLK3P49761 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
CLK3P49761 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CLK3P49761 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CLK3P49761 MIR544A-201ENST00000384855 91 ntBASIC2.88□□□□□ -1.95
CLK3P49761 MIR181B1-201ENST00000385240 110 ntBASIC2.88□□□□□ -1.95
CLK3P49761 Y_RNA.580-201ENST00000391004 95 ntBASIC2.88□□□□□ -1.95
CLK3P49761 MIR1289-1-201ENST00000408836 144 ntBASIC2.88□□□□□ -1.95
CLK3P49761 RPS26P42-201ENST00000413485 326 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AC078809.1-201ENST00000427601 140 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK3P49761 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK3P49761 RPL23AP3-201ENST00000453844 468 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AL441985.1-201ENST00000457727 251 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK3P49761 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
CLK3P49761 AC021231.3-201ENST00000558497 370 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.88□□□□□ -1.95
CLK3P49761 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AC008739.2-201ENST00000597006 317 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AL391813.1-201ENST00000603098 260 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AC005828.6-201ENST00000606610 232 ntBASIC2.88□□□□□ -1.95
CLK3P49761 AC010999.1-201ENST00000611856 324 ntBASIC2.88□□□□□ -1.95
CLK3P49761 MIR7112-201ENST00000616126 65 ntBASIC2.88□□□□□ -1.95
CLK3P49761 MTND1P7-201ENST00000632801 297 ntBASIC2.88□□□□□ -1.95
CLK3P49761 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLK3P49761 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.88□□□□□ -1.95
CLK3P49761 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
CLK3P49761 AC099654.7-201ENST00000635788 2127 ntBASIC2.87□□□□□ -1.95
CLK3P49761 ZNF204P-201ENST00000416749 2397 ntBASIC2.87□□□□□ -1.95
CLK3P49761 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLK3P49761 AC092268.1-201ENST00000342691 405 ntBASIC2.87□□□□□ -1.95
CLK3P49761 RNA5SP274-201ENST00000410484 108 ntBASIC2.87□□□□□ -1.95
CLK3P49761 AC024067.1-201ENST00000426199 223 ntBASIC2.87□□□□□ -1.95
CLK3P49761 AC112220.1-201ENST00000434628 355 ntBASIC2.87□□□□□ -1.95
CLK3P49761 AC010095.1-201ENST00000443543 144 ntBASIC2.87□□□□□ -1.95
CLK3P49761 Z75741.1-201ENST00000446793 314 ntBASIC2.87□□□□□ -1.95
CLK3P49761 AC012308.1-201ENST00000451232 178 ntBASIC2.87□□□□□ -1.95
CLK3P49761 AC107626.1-201ENST00000471084 183 ntBASIC2.87□□□□□ -1.95
CLK3P49761 AC074133.1-201ENST00000515696 183 ntBASIC2.87□□□□□ -1.95
CLK3P49761 CKS1BP7-201ENST00000522230 235 ntBASIC2.87□□□□□ -1.95
CLK3P49761 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CLK3P49761 AC009163.5-201ENST00000575421 637 ntBASIC2.87□□□□□ -1.95
CLK3P49761 MIR5004-201ENST00000579078 107 ntBASIC2.87□□□□□ -1.95
CLK3P49761 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CLK3P49761 AL357075.2-201ENST00000614906 189 ntBASIC2.87□□□□□ -1.95
CLK3P49761 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
CLK3P49761 AP003122.5-201ENST00000527668 3766 ntBASIC2.87□□□□□ -1.95
CLK3P49761 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.87□□□□□ -1.95
CLK3P49761 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.86□□□□□ -1.95
CLK3P49761 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
CLK3P49761 AC073346.2-201ENST00000624724 2058 ntBASIC2.86□□□□□ -1.95
CLK3P49761 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLK3P49761 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.86□□□□□ -1.95
CLK3P49761 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLK3P49761 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLK3P49761 RNU6-653P-201ENST00000363074 106 ntBASIC2.86□□□□□ -1.95
CLK3P49761 RNU6-873P-201ENST00000363833 107 ntBASIC2.86□□□□□ -1.95
CLK3P49761 SNORA36A-201ENST00000384221 132 ntBASIC2.86□□□□□ -1.95
CLK3P49761 SNORA7.4-201ENST00000384249 137 ntBASIC2.86□□□□□ -1.95
CLK3P49761 RNU6-748P-201ENST00000384648 107 ntBASIC2.86□□□□□ -1.95
CLK3P49761 MIR147B-201ENST00000390185 80 ntBASIC2.86□□□□□ -1.95
CLK3P49761 SNORA40.19-201ENST00000390846 128 ntBASIC2.86□□□□□ -1.95
CLK3P49761 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
CLK3P49761 AC244670.1-201ENST00000436879 112 ntBASIC2.86□□□□□ -1.95
CLK3P49761 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.86□□□□□ -1.95
CLK3P49761 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.86□□□□□ -1.95
CLK3P49761 AC009237.7-201ENST00000447357 229 ntBASIC2.86□□□□□ -1.95
CLK3P49761 SNRPGP7-201ENST00000469016 106 ntBASIC2.86□□□□□ -1.95
CLK3P49761 RN7SL20P-201ENST00000488827 297 ntBASIC2.86□□□□□ -1.95
CLK3P49761 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.86□□□□□ -1.95
CLK3P49761 MRPS36P2-201ENST00000512569 299 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms