Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU1-76P-201ENST00000362903 159 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 Y_RNA.123-201ENST00000363338 102 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 SNORA18.2-201ENST00000383865 132 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 RNU6-214P-201ENST00000384130 107 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 SNORA29-201ENST00000384183 140 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 MIR450B-201ENST00000401182 78 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 RNU6-325P-201ENST00000411132 105 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 ARL5AP1-201ENST00000418991 388 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 AC016907.1-201ENST00000419483 435 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.21□□□□□ -2.22
CXCL12P48061 MTATP6P26-201ENST00000445926 662 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 HSPE1P24-201ENST00000450782 238 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 RNU1-131P-201ENST00000458943 161 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 U8.21-201ENST00000459536 136 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 AC092991.1-201ENST00000477176 376 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 SNORA44.1-201ENST00000517031 108 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.21□□□□□ -2.22
CXCL12P48061 HMGB1P33-201ENST00000563485 527 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.21□□□□□ -2.22
CXCL12P48061 RMST_3.1-201ENST00000611651 109 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 AL136221.1-201ENST00000621449 509 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 AC068137.3-201ENST00000639191 341 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CXCL12P48061 RNU5B-2P-201ENST00000363036 113 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 RNU4-24P-201ENST00000364565 139 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 SNORD31B-201ENST00000364977 69 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 Y_RNA.373-201ENST00000365600 103 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 Y_RNA.517-201ENST00000384551 106 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 MIR549A-201ENST00000385268 96 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CXCL12P48061 RNU6-908P-201ENST00000410160 94 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 Y_RNA.615-201ENST00000410769 117 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 ERLEC1P1-201ENST00000433806 578 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.2□□□□□ -2.22
CXCL12P48061 SEPT14P3-201ENST00000439401 183 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 MTND1P1-201ENST00000445453 368 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AL732372.2-207ENST00000445840 183 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 SEPT14P2-201ENST00000453405 183 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AC010409.1-201ENST00000487382 476 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 RPS23P5-201ENST00000495419 428 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AC097473.1-201ENST00000508142 408 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 FAM206BP-201ENST00000510179 541 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 SEPT14P4-201ENST00000513445 186 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 RNU6-113P-201ENST00000516653 101 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 FO082796.1-201ENST00000523795 183 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL12P48061 AC245505.1-201ENST00000556398 224 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 SNORA59B-202ENST00000578183 701 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AC005786.1-201ENST00000588553 154 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AL162413.1-201ENST00000603198 110 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AC010900.2-201ENST00000604508 210 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 CTHRC1P1-201ENST00000605383 469 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.2□□□□□ -2.22
CXCL12P48061 AC104458.1-201ENST00000608243 463 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 AF250324.2-201ENST00000608299 610 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.2□□□□□ -2.22
CXCL12P48061 MIR6767-201ENST00000637302 66 ntBASIC1.2□□□□□ -2.22
CXCL12P48061 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.19□□□□□ -2.22
CXCL12P48061 Y_RNA.38-201ENST00000362617 102 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 RNU6-545P-201ENST00000362681 104 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 RNU6-1252P-201ENST00000363054 104 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 RNU6-439P-201ENST00000384188 106 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 RNU6-1026P-201ENST00000384465 108 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 MIR521-1-201ENST00000384902 87 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CXCL12P48061 RNA5SP494-201ENST00000410653 129 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL12P48061 USP9YP28-201ENST00000435142 589 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 MTCO1P44-201ENST00000441935 243 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL12P48061 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL12P48061 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.19□□□□□ -2.22
CXCL12P48061 AC016925.1-201ENST00000458303 298 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AC010531.2-201ENST00000465012 153 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.19□□□□□ -2.22
CXCL12P48061 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.19□□□□□ -2.22
CXCL12P48061 AC091435.1-201ENST00000505442 584 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.19□□□□□ -2.22
CXCL12P48061 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL12P48061 Y_RNA.665-201ENST00000516177 98 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 RNA5SP61-201ENST00000516453 100 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL12P48061 AC016256.1-201ENST00000547971 354 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 SUB1P4-201ENST00000566062 339 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 MIR5094-201ENST00000578766 85 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 CPDP1-201ENST00000579660 283 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AC100830.2-201ENST00000581636 240 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AC016727.2-201ENST00000603988 621 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AC080013.6-201ENST00000606185 215 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AC004492.1-201ENST00000607036 742 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.19□□□□□ -2.22
CXCL12P48061 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL12P48061 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.19□□□□□ -2.22
CXCL12P48061 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CXCL12P48061 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms