Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RPL37P10-201ENST00000412884 288 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AL590556.1-201ENST00000423231 483 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 MTND2P29-201ENST00000438595 412 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 DAP3P1-201ENST00000441522 278 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
BRCC3P46736 MTND3P10-201ENST00000450967 341 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 PRELID3BP1-201ENST00000457142 540 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 RPL7P42-201ENST00000481005 679 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC132942.1-201ENST00000486753 483 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC114801.2-201ENST00000503825 781 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 RNU6-120P-201ENST00000516077 103 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 RNU1-54P-201ENST00000517181 120 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.8□□□□□ -2.12
BRCC3P46736 CYP4A27P-201ENST00000567218 190 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC009229.3-201ENST00000608056 282 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC005520.5-201ENST00000613926 164 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC104260.1-201ENST00000616660 539 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
BRCC3P46736 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
BRCC3P46736 AC233981.2-201ENST00000611524 1614 ntBASIC1.8□□□□□ -2.12
BRCC3P46736 AC009487.4-201ENST00000624969 3585 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 Y_RNA.70-201ENST00000362886 110 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 RNU6-596P-201ENST00000365395 98 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 U8.10-201ENST00000384260 133 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 RNU6-1093P-201ENST00000391194 107 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 MIR208B-201ENST00000401172 77 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 MIR1262-201ENST00000408276 93 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 RNA5SP450-201ENST00000411206 102 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AL139396.1-201ENST00000421137 167 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.79□□□□□ -2.12
BRCC3P46736 AC107399.1-201ENST00000451226 265 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.79□□□□□ -2.12
BRCC3P46736 RNA5SP233-201ENST00000459153 113 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AC087477.1-201ENST00000465747 340 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 RNU6-1016P-201ENST00000516689 94 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 CBX3P8-201ENST00000532412 525 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.79□□□□□ -2.12
BRCC3P46736 AC005668.1-201ENST00000571142 476 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AC016727.2-201ENST00000603988 621 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AP000654.2-201ENST00000605633 586 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 uc_338.5-201ENST00000611839 155 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 AC099654.5-201ENST00000636479 350 ntBASIC1.79□□□□□ -2.12
BRCC3P46736 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
BRCC3P46736 MTND5P9-201ENST00000503854 1755 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 MTND4P12-201ENST00000498999 1377 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 RNU6-661P-201ENST00000362409 107 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 RNU6-601P-201ENST00000384540 107 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 RNA5SP465-201ENST00000391195 109 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 Y_RNA.595-201ENST00000410403 105 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 RNA5SP494-201ENST00000410653 129 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AC004866.1-201ENST00000411748 78 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AC243428.1-201ENST00000421099 264 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.78□□□□□ -2.12
BRCC3P46736 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.78□□□□□ -2.12
BRCC3P46736 RPL23AP3-201ENST00000453844 468 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 RPL30P10-201ENST00000488148 337 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.78□□□□□ -2.12
BRCC3P46736 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.78□□□□□ -2.12
BRCC3P46736 ATP5EP1-201ENST00000510257 156 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 ACA59.1-201ENST00000515966 143 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 RNU2-44P-201ENST00000516795 194 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AC134698.4-201ENST00000523451 826 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 CBX3P4-201ENST00000538909 354 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 EIF4A1P12-201ENST00000551910 141 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.78□□□□□ -2.12
BRCC3P46736 AC005014.2-201ENST00000607795 599 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AL132765.2-201ENST00000610812 351 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.78□□□□□ -2.12
BRCC3P46736 AC091932.3-201ENST00000624223 323 ntBASIC1.78□□□□□ -2.12
BRCC3P46736 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
BRCC3P46736 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 Y_RNA.99-201ENST00000363138 105 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 Y_RNA.482-201ENST00000384377 111 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 SNORD14D-201ENST00000384390 87 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 SNORA12.2-201ENST00000391040 156 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCC3P46736 EIF4EP2-201ENST00000422816 654 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 MTCO3P29-201ENST00000432119 779 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.77□□□□□ -2.13
BRCC3P46736 MTND5P20-201ENST00000448677 143 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
BRCC3P46736 RNU6-1098P-201ENST00000516772 96 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCC3P46736 APOOP3-201ENST00000536787 586 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 AC016256.1-201ENST00000547971 354 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.77□□□□□ -2.13
BRCC3P46736 MIR3618-201ENST00000580330 88 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 MIR4273-201ENST00000582824 84 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 AL627230.6-201ENST00000611129 280 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
BRCC3P46736 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
BRCC3P46736 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms