Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 MTND4P12-201ENST00000498999 1377 ntBASIC1.8□□□□□ -2.12
TNFRSF4P43489 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.8□□□□□ -2.12
TNFRSF4P43489 KPNA2P1-201ENST00000458289 1591 ntBASIC1.8□□□□□ -2.12
TNFRSF4P43489 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 RNU6-457P-201ENST00000363999 107 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 Y_RNA.332-201ENST00000365271 113 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 Y_RNA.473-201ENST00000384333 102 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
TNFRSF4P43489 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 MTND4P18-201ENST00000447010 465 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 snoU13.6-201ENST00000458785 104 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 FO393415.2-201ENST00000480085 343 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 RNU6-1053P-201ENST00000515930 101 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 RNU6-507P-201ENST00000516045 100 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 RNU5F-4P-201ENST00000516581 114 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 Y_RNA.702-201ENST00000516843 96 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 MRPS36P4-201ENST00000534436 298 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 AC090517.1-201ENST00000569307 266 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 MIR4273-201ENST00000582824 84 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 AC008749.1-201ENST00000597650 306 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.79□□□□□ -2.12
TNFRSF4P43489 Y_RNA.804-201ENST00000615262 101 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.79□□□□□ -2.12
TNFRSF4P43489 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
TNFRSF4P43489 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 Y_RNA.142-201ENST00000363491 102 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 Y_RNA.238-201ENST00000364441 102 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 RNU6-1286P-201ENST00000383871 107 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 SNORA29-201ENST00000384183 140 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 RNU6-784P-201ENST00000384330 106 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 SNORA8-201ENST00000384574 139 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 RNA5SP212-201ENST00000391223 107 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 RNA5SP494-201ENST00000410653 129 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 RNU2-41P-201ENST00000410991 178 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 NCOR1P3-201ENST00000420479 303 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 MTATP6P23-201ENST00000440153 476 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 AL035666.1-201ENST00000446195 348 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFRSF4P43489 Y_RNA.635-201ENST00000459041 101 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 RNA5SP57-201ENST00000459463 123 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC091951.2-201ENST00000500762 203 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC105029.1-201ENST00000520250 669 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.78□□□□□ -2.12
TNFRSF4P43489 FGF7P1-201ENST00000582820 288 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC009994.1-201ENST00000606889 253 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC092794.2-201ENST00000620933 563 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC099654.5-201ENST00000636479 350 ntBASIC1.78□□□□□ -2.12
TNFRSF4P43489 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TNFRSF4P43489 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TNFRSF4P43489 AC080100.1-201ENST00000624239 5356 ntBASIC1.78□□□□□ -2.13
TNFRSF4P43489 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.13
TNFRSF4P43489 Y_RNA.4-201ENST00000362333 112 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 RNA5SP493-201ENST00000364115 91 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 RNU6-593P-201ENST00000364716 112 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 Y_RNA.339-201ENST00000365325 102 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 RNU6-1009P-201ENST00000390996 107 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 RNU6-1093P-201ENST00000391194 107 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 AC123900.1-201ENST00000420390 96 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 AC093019.1-201ENST00000443135 252 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.77□□□□□ -2.13
TNFRSF4P43489 RNU7-14P-201ENST00000459331 62 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 ATP5EP1-201ENST00000510257 156 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 RNU6-875P-201ENST00000516488 106 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 Y_RNA.691-201ENST00000516611 103 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFRSF4P43489 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.77□□□□□ -2.13
TNFRSF4P43489 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 AC018462.2-201ENST00000605375 395 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 snoU13.31-201ENST00000607291 104 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 AC005296.1-201ENST00000616145 209 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 AL590240.4-201ENST00000616908 390 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 PISRT1.1-201ENST00000616930 107 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 AC091932.3-201ENST00000624223 323 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TNFRSF4P43489 MTND5P9-201ENST00000503854 1755 ntBASIC1.77□□□□□ -2.13
TNFRSF4P43489 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TNFRSF4P43489 Y_RNA.2-201ENST00000362330 96 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 SNORD50.1-201ENST00000362987 71 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 Y_RNA.482-201ENST00000384377 111 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 RNU6-1026P-201ENST00000384465 108 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TNFRSF4P43489 Y_RNA.594-201ENST00000410373 140 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 RNA5SP501-201ENST00000410990 112 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 EIF4EP2-201ENST00000422816 654 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 SNORD5.1-201ENST00000458800 75 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 RNU6-1098P-201ENST00000516772 96 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 Y_RNA.708-201ENST00000516950 96 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 AC087441.2-201ENST00000529141 262 ntBASIC1.76□□□□□ -2.13
TNFRSF4P43489 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms