Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 HMGN1P12-201ENST00000499125 195 ntBASIC1.32□□□□□ -2.2
MDH1P40925 RN7SKP179-201ENST00000516126 217 ntBASIC1.32□□□□□ -2.2
MDH1P40925 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.32□□□□□ -2.2
MDH1P40925 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.32□□□□□ -2.2
MDH1P40925 AC026371.1-201ENST00000551867 419 ntBASIC1.32□□□□□ -2.2
MDH1P40925 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.32□□□□□ -2.2
MDH1P40925 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.32□□□□□ -2.2
MDH1P40925 CPDP1-201ENST00000579660 283 ntBASIC1.32□□□□□ -2.2
MDH1P40925 AC146944.4-201ENST00000602697 718 ntBASIC1.32□□□□□ -2.2
MDH1P40925 RN7SKP299-201ENST00000606679 301 ntBASIC1.32□□□□□ -2.2
MDH1P40925 AC009509.4-201ENST00000619202 509 ntBASIC1.32□□□□□ -2.2
MDH1P40925 ZNF72P-201ENST00000425869 1908 ntBASIC1.32□□□□□ -2.2
MDH1P40925 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
MDH1P40925 RNU6-417P-201ENST00000384712 107 ntBASIC1.31□□□□□ -2.2
MDH1P40925 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
MDH1P40925 AC008134.1-201ENST00000420943 193 ntBASIC1.31□□□□□ -2.2
MDH1P40925 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.31□□□□□ -2.2
MDH1P40925 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.31□□□□□ -2.2
MDH1P40925 SNORD13-201ENST00000459299 104 ntBASIC1.31□□□□□ -2.2
MDH1P40925 RNA5SP54-201ENST00000516951 92 ntBASIC1.31□□□□□ -2.2
MDH1P40925 AP003033.1-201ENST00000527244 415 ntBASIC1.31□□□□□ -2.2
MDH1P40925 AL161670.1-201ENST00000554348 137 ntBASIC1.31□□□□□ -2.2
MDH1P40925 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
MDH1P40925 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.31□□□□□ -2.2
MDH1P40925 AC040896.1-201ENST00000613819 479 ntBASIC1.31□□□□□ -2.2
MDH1P40925 MIR6863-201ENST00000636112 90 ntBASIC1.31□□□□□ -2.2
MDH1P40925 AC121333.1-201ENST00000567488 2709 ntBASIC1.31□□□□□ -2.2
MDH1P40925 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
MDH1P40925 SNORA4.2-201ENST00000365313 147 ntBASIC1.3□□□□□ -2.2
MDH1P40925 MIR513A1-201ENST00000385138 129 ntBASIC1.3□□□□□ -2.2
MDH1P40925 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
MDH1P40925 DEFB108C-201ENST00000400154 252 ntBASIC1.3□□□□□ -2.2
MDH1P40925 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.3□□□□□ -2.2
MDH1P40925 RNU6-344P-201ENST00000516635 111 ntBASIC1.3□□□□□ -2.2
MDH1P40925 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.3□□□□□ -2.2
MDH1P40925 AL158211.1-201ENST00000566763 763 ntBASIC1.3□□□□□ -2.2
MDH1P40925 MIR3611-201ENST00000584484 83 ntBASIC1.3□□□□□ -2.2
MDH1P40925 AC004492.1-201ENST00000607036 742 ntBASIC1.3□□□□□ -2.2
MDH1P40925 MIR8065-201ENST00000620577 100 ntBASIC1.3□□□□□ -2.2
MDH1P40925 AC097520.1-201ENST00000624435 385 ntBASIC1.3□□□□□ -2.2
MDH1P40925 ZNF204P-201ENST00000416749 2397 ntBASIC1.3□□□□□ -2.2
MDH1P40925 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
MDH1P40925 RNU6-128P-201ENST00000383976 107 ntBASIC1.29□□□□□ -2.2
MDH1P40925 MIR764-201ENST00000390811 85 ntBASIC1.29□□□□□ -2.2
MDH1P40925 MIR450B-201ENST00000401182 78 ntBASIC1.29□□□□□ -2.2
MDH1P40925 AC004866.1-201ENST00000411748 78 ntBASIC1.29□□□□□ -2.2
MDH1P40925 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.29□□□□□ -2.2
MDH1P40925 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.29□□□□□ -2.2
MDH1P40925 MTND1P26-201ENST00000440488 538 ntBASIC1.29□□□□□ -2.2
MDH1P40925 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.29□□□□□ -2.2
MDH1P40925 AL353572.1-201ENST00000442490 417 ntBASIC1.29□□□□□ -2.2
MDH1P40925 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.29□□□□□ -2.2
MDH1P40925 snoU13.23-201ENST00000458863 104 ntBASIC1.29□□□□□ -2.2
MDH1P40925 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.29□□□□□ -2.2
MDH1P40925 RPL23AP75-201ENST00000491601 451 ntBASIC1.29□□□□□ -2.2
MDH1P40925 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
MDH1P40925 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.29□□□□□ -2.2
MDH1P40925 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.29□□□□□ -2.2
MDH1P40925 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.29□□□□□ -2.2
MDH1P40925 AC015720.1-201ENST00000565251 277 ntBASIC1.29□□□□□ -2.2
MDH1P40925 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.29□□□□□ -2.2
MDH1P40925 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.29□□□□□ -2.2
MDH1P40925 AL158209.2-201ENST00000619266 216 ntBASIC1.29□□□□□ -2.2
MDH1P40925 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.29□□□□□ -2.2
MDH1P40925 snoZ196.1-201ENST00000625269 89 ntBASIC1.29□□□□□ -2.2
MDH1P40925 RNU6-1123P-201ENST00000362347 106 ntBASIC1.28□□□□□ -2.2
MDH1P40925 Y_RNA.231-201ENST00000364358 102 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNA5SP259-201ENST00000365541 109 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNU6-1119P-201ENST00000384349 108 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
MDH1P40925 MIR514A2-201ENST00000385131 88 ntBASIC1.28□□□□□ -2.2
MDH1P40925 MIR514A3-201ENST00000385132 88 ntBASIC1.28□□□□□ -2.2
MDH1P40925 AF228730.1-201ENST00000397972 663 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RPL31P58-201ENST00000469001 379 ntBASIC1.28□□□□□ -2.2
MDH1P40925 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.28□□□□□ -2.2
MDH1P40925 RNU1-142P-201ENST00000516682 145 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNU6-1198P-201ENST00000516904 67 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNU6-835P-201ENST00000516974 104 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNU1-117P-201ENST00000517041 158 ntBASIC1.28□□□□□ -2.2
MDH1P40925 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.28□□□□□ -2.2
MDH1P40925 AC097065.2-201ENST00000608159 533 ntBASIC1.28□□□□□ -2.2
MDH1P40925 MIR6715A-201ENST00000615929 79 ntBASIC1.28□□□□□ -2.2
MDH1P40925 AC008873.1-201ENST00000625051 138 ntBASIC1.28□□□□□ -2.2
MDH1P40925 RNU1-17P-201ENST00000363022 152 ntBASIC1.27□□□□□ -2.21
MDH1P40925 SNORA33-201ENST00000363664 130 ntBASIC1.27□□□□□ -2.21
MDH1P40925 RNU6-1240P-201ENST00000365155 104 ntBASIC1.27□□□□□ -2.21
MDH1P40925 RNU6-245P-201ENST00000384020 107 ntBASIC1.27□□□□□ -2.21
MDH1P40925 RNU6-790P-201ENST00000384479 105 ntBASIC1.27□□□□□ -2.21
MDH1P40925 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
MDH1P40925 RNU6-648P-201ENST00000410190 107 ntBASIC1.27□□□□□ -2.21
MDH1P40925 TPT1P7-201ENST00000458300 517 ntBASIC1.27□□□□□ -2.21
MDH1P40925 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.27□□□□□ -2.21
MDH1P40925 AC108210.2-201ENST00000503681 201 ntBASIC1.27□□□□□ -2.21
MDH1P40925 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.27□□□□□ -2.21
MDH1P40925 AC016957.1-201ENST00000534895 309 ntBASIC1.27□□□□□ -2.21
MDH1P40925 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.27□□□□□ -2.21
MDH1P40925 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.27□□□□□ -2.21
MDH1P40925 AC015712.3-201ENST00000559380 164 ntBASIC1.27□□□□□ -2.21
MDH1P40925 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms