Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 Y_RNA.231-201ENST00000364358 102 ntBASIC1.29□□□□□ -2.2
RORAP35398 Y_RNA.372-201ENST00000365599 102 ntBASIC1.29□□□□□ -2.2
RORAP35398 RNU6-877P-201ENST00000383868 107 ntBASIC1.29□□□□□ -2.2
RORAP35398 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
RORAP35398 MIR487A-201ENST00000385009 80 ntBASIC1.29□□□□□ -2.2
RORAP35398 EIF4E2P1-201ENST00000393781 255 ntBASIC1.29□□□□□ -2.2
RORAP35398 MTCO1P21-201ENST00000416634 589 ntBASIC1.29□□□□□ -2.2
RORAP35398 MRPS10P2-201ENST00000431226 381 ntBASIC1.29□□□□□ -2.2
RORAP35398 snoU13.30-201ENST00000458951 104 ntBASIC1.29□□□□□ -2.2
RORAP35398 AC099513.1-201ENST00000490423 301 ntBASIC1.29□□□□□ -2.2
RORAP35398 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
RORAP35398 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
RORAP35398 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.29□□□□□ -2.2
RORAP35398 MTND2P38-201ENST00000522536 667 ntBASIC1.29□□□□□ -2.2
RORAP35398 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.29□□□□□ -2.2
RORAP35398 RRN3P3-201ENST00000549207 578 ntBASIC1.29□□□□□ -2.2
RORAP35398 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.29□□□□□ -2.2
RORAP35398 AC104458.1-201ENST00000608243 463 ntBASIC1.29□□□□□ -2.2
RORAP35398 AC005562.2-201ENST00000618264 111 ntBASIC1.29□□□□□ -2.2
RORAP35398 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
RORAP35398 AC095038.3-201ENST00000634439 195 ntBASIC1.29□□□□□ -2.2
RORAP35398 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RORAP35398 RNU6-271P-201ENST00000363858 105 ntBASIC1.28□□□□□ -2.2
RORAP35398 Y_RNA.226-201ENST00000364337 114 ntBASIC1.28□□□□□ -2.2
RORAP35398 SNORD116-2-201ENST00000384274 95 ntBASIC1.28□□□□□ -2.2
RORAP35398 Y_RNA.481-201ENST00000384373 102 ntBASIC1.28□□□□□ -2.2
RORAP35398 SNORD116-6-201ENST00000384711 96 ntBASIC1.28□□□□□ -2.2
RORAP35398 MIR520A-201ENST00000384862 85 ntBASIC1.28□□□□□ -2.2
RORAP35398 MIR1283-1-201ENST00000408494 87 ntBASIC1.28□□□□□ -2.2
RORAP35398 EBAG9P1-201ENST00000418955 543 ntBASIC1.28□□□□□ -2.2
RORAP35398 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.28□□□□□ -2.2
RORAP35398 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.28□□□□□ -2.2
RORAP35398 AC004386.2-201ENST00000441858 148 ntBASIC1.28□□□□□ -2.2
RORAP35398 RPL26P26-201ENST00000480251 434 ntBASIC1.28□□□□□ -2.2
RORAP35398 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.28□□□□□ -2.2
RORAP35398 AC067942.3-201ENST00000512025 362 ntBASIC1.28□□□□□ -2.2
RORAP35398 RNU6-1041P-201ENST00000516254 102 ntBASIC1.28□□□□□ -2.2
RORAP35398 RNU6-1332P-201ENST00000516666 104 ntBASIC1.28□□□□□ -2.2
RORAP35398 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.28□□□□□ -2.2
RORAP35398 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.28□□□□□ -2.2
RORAP35398 AC100830.2-201ENST00000581636 240 ntBASIC1.28□□□□□ -2.2
RORAP35398 FGF7P1-201ENST00000582820 288 ntBASIC1.28□□□□□ -2.2
RORAP35398 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
RORAP35398 AC068137.3-201ENST00000639191 341 ntBASIC1.28□□□□□ -2.2
RORAP35398 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RORAP35398 OR4G1P-203ENST00000641984 1631 ntBASIC1.27□□□□□ -2.21
RORAP35398 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RORAP35398 MIR302D-201ENST00000362275 68 ntBASIC1.27□□□□□ -2.21
RORAP35398 SNORD113-7-201ENST00000363762 77 ntBASIC1.27□□□□□ -2.21
RORAP35398 SNORA63D-201ENST00000364359 132 ntBASIC1.27□□□□□ -2.21
RORAP35398 RNU6-203P-201ENST00000384038 104 ntBASIC1.27□□□□□ -2.21
RORAP35398 RNU6-968P-201ENST00000384076 107 ntBASIC1.27□□□□□ -2.21
RORAP35398 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
RORAP35398 MIR300-201ENST00000401138 83 ntBASIC1.27□□□□□ -2.21
RORAP35398 RNU6-908P-201ENST00000410160 94 ntBASIC1.27□□□□□ -2.21
RORAP35398 RNA5SP494-201ENST00000410653 129 ntBASIC1.27□□□□□ -2.21
RORAP35398 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
RORAP35398 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.27□□□□□ -2.21
RORAP35398 ARL5AP1-201ENST00000418991 388 ntBASIC1.27□□□□□ -2.21
RORAP35398 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
RORAP35398 HSPE1P9-201ENST00000440046 311 ntBASIC1.27□□□□□ -2.21
RORAP35398 AC016717.1-201ENST00000448918 286 ntBASIC1.27□□□□□ -2.21
RORAP35398 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.27□□□□□ -2.21
RORAP35398 MTCO3P8-201ENST00000453691 755 ntBASIC1.27□□□□□ -2.21
RORAP35398 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
RORAP35398 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
RORAP35398 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.27□□□□□ -2.21
RORAP35398 Y_RNA.665-201ENST00000516177 98 ntBASIC1.27□□□□□ -2.21
RORAP35398 Y_RNA.704-201ENST00000516851 102 ntBASIC1.27□□□□□ -2.21
RORAP35398 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
RORAP35398 AL512360.1-201ENST00000555346 234 ntBASIC1.27□□□□□ -2.21
RORAP35398 MIR3976-201ENST00000606807 139 ntBASIC1.27□□□□□ -2.21
RORAP35398 AL355802.3-201ENST00000607571 545 ntBASIC1.27□□□□□ -2.21
RORAP35398 MIR8076-201ENST00000611401 83 ntBASIC1.27□□□□□ -2.21
RORAP35398 AC126177.8-201ENST00000618339 1015 ntBASIC1.27□□□□□ -2.21
RORAP35398 MIR8063-201ENST00000621930 81 ntBASIC1.27□□□□□ -2.21
RORAP35398 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
RORAP35398 BX322639.1-202ENST00000423987 2213 ntBASIC1.26□□□□□ -2.21
RORAP35398 SNORA33-201ENST00000363664 130 ntBASIC1.26□□□□□ -2.21
RORAP35398 RNU1-96P-201ENST00000364163 162 ntBASIC1.26□□□□□ -2.21
RORAP35398 RNU6-1019P-201ENST00000364424 107 ntBASIC1.26□□□□□ -2.21
RORAP35398 RNU6-1042P-201ENST00000384204 107 ntBASIC1.26□□□□□ -2.21
RORAP35398 RNU6-784P-201ENST00000384330 106 ntBASIC1.26□□□□□ -2.21
RORAP35398 RNU2-16P-201ENST00000410712 136 ntBASIC1.26□□□□□ -2.21
RORAP35398 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.26□□□□□ -2.21
RORAP35398 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.26□□□□□ -2.21
RORAP35398 RNU7-187P-201ENST00000458985 68 ntBASIC1.26□□□□□ -2.21
RORAP35398 AC007215.1-201ENST00000464893 276 ntBASIC1.26□□□□□ -2.21
RORAP35398 RPL36AP21-201ENST00000490372 323 ntBASIC1.26□□□□□ -2.21
RORAP35398 AC107401.1-201ENST00000503426 685 ntBASIC1.26□□□□□ -2.21
RORAP35398 RNA5SP384-201ENST00000516615 116 ntBASIC1.26□□□□□ -2.21
RORAP35398 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RORAP35398 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.26□□□□□ -2.21
RORAP35398 AC084364.2-201ENST00000546924 395 ntBASIC1.26□□□□□ -2.21
RORAP35398 AC026470.2-201ENST00000561492 181 ntBASIC1.26□□□□□ -2.21
RORAP35398 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.26□□□□□ -2.21
RORAP35398 MIR4753-201ENST00000585119 83 ntBASIC1.26□□□□□ -2.21
RORAP35398 AC010525.2-201ENST00000590920 195 ntBASIC1.26□□□□□ -2.21
RORAP35398 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.26□□□□□ -2.21
RORAP35398 AC004492.1-201ENST00000607036 742 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms