Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RNU6-637P-201ENST00000384050 107 ntBASIC-1.43□□□□□ -2.64
CPS1P31327 RNA5SP390-201ENST00000410191 113 ntBASIC-1.43□□□□□ -2.64
CPS1P31327 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.43□□□□□ -2.64
CPS1P31327 RNU6-897P-201ENST00000517135 105 ntBASIC-1.43□□□□□ -2.64
CPS1P31327 AC138869.1-201ENST00000568623 124 ntBASIC-1.43□□□□□ -2.64
CPS1P31327 NAMPTP3-201ENST00000569273 224 ntBASIC-1.43□□□□□ -2.64
CPS1P31327 AC068790.2-201ENST00000602601 557 ntBASIC-1.43□□□□□ -2.64
CPS1P31327 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
CPS1P31327 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.44□□□□□ -2.64
CPS1P31327 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.44□□□□□ -2.64
CPS1P31327 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.44□□□□□ -2.64
CPS1P31327 MTND3P4-201ENST00000453537 303 ntBASIC-1.44□□□□□ -2.64
CPS1P31327 AL163973.1-201ENST00000484753 577 ntBASIC-1.44□□□□□ -2.64
CPS1P31327 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.44□□□□□ -2.64
CPS1P31327 AL159153.1-201ENST00000619688 317 ntBASIC-1.44□□□□□ -2.64
CPS1P31327 MTND4P21-201ENST00000453886 1357 ntBASIC-1.44□□□□□ -2.64
CPS1P31327 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 RNA5SP467-201ENST00000391274 118 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 DPRXP1-201ENST00000426312 460 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 RPL37P6-201ENST00000460682 294 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 RPL39P34-201ENST00000477141 156 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 RNU2-60P-201ENST00000517290 128 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 VN1R88P-201ENST00000596787 292 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 RNU6-512P-201ENST00000364438 103 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 SNORA32.2-201ENST00000384049 122 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.45□□□□□ -2.64
CPS1P31327 AC079354.2-201ENST00000453523 154 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 RNU6-572P-201ENST00000516724 80 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 AC079610.2-201ENST00000604818 690 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 AC092656.1-203ENST00000624134 423 ntBASIC-1.45□□□□□ -2.64
CPS1P31327 SNORA3B-201ENST00000391305 131 ntBASIC-1.46□□□□□ -2.64
CPS1P31327 MTCO2P31-201ENST00000402702 684 ntBASIC-1.46□□□□□ -2.64
CPS1P31327 SNORD100-201ENST00000408573 76 ntBASIC-1.46□□□□□ -2.64
CPS1P31327 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.46□□□□□ -2.64
CPS1P31327 LRRC6P1-201ENST00000532188 885 ntBASIC-1.46□□□□□ -2.64
CPS1P31327 BNIP3P24-201ENST00000593398 557 ntBASIC-1.46□□□□□ -2.64
CPS1P31327 MTND5P33-201ENST00000571250 1450 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AL590135.1-201ENST00000422215 156 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AC019205.3-201ENST00000424573 156 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AC016700.2-201ENST00000446011 156 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AC010531.2-201ENST00000465012 153 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AC015911.1-201ENST00000495111 156 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AC116562.3-201ENST00000506136 177 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AC093023.1-201ENST00000547375 507 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.47□□□□□ -2.64
CPS1P31327 AC068792.1-201ENST00000621354 417 ntBASIC-1.47□□□□□ -2.64
CPS1P31327 RNU6-167P-201ENST00000384292 106 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 RNU2-3P-201ENST00000410144 191 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 AC020550.1-201ENST00000447385 163 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 AC007327.1-201ENST00000447461 264 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 AC104629.1-201ENST00000494226 508 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 TMEM251P1-201ENST00000503717 318 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 SNORD111.1-201ENST00000516421 86 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 AC100830.2-201ENST00000581636 240 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.48□□□□□ -2.65
CPS1P31327 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 RNU6-24P-201ENST00000384440 107 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 AL079342.2-201ENST00000403367 482 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 DEFB130D-201ENST00000426866 237 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 MTND4P15-201ENST00000437913 1033 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 RNU6-977P-201ENST00000516411 103 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 RNA5SP461-201ENST00000516451 104 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 RNU6-856P-201ENST00000516959 98 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 AC040926.1-201ENST00000530195 238 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 LARP7P2-201ENST00000575306 125 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.49□□□□□ -2.65
CPS1P31327 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.49□□□□□ -2.65
CPS1P31327 MIR8054-201ENST00000620877 86 ntBASIC-1.49□□□□□ -2.65
CPS1P31327 AC106754.1-201ENST00000562632 1513 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
CPS1P31327 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.5□□□□□ -2.65
CPS1P31327 AL606517.2-201ENST00000442855 241 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.5□□□□□ -2.65
CPS1P31327 AP000484.1-201ENST00000620067 1252 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 SNORA26-201ENST00000391286 122 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 USP9YP11-201ENST00000427537 717 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AL606517.1-201ENST00000446914 387 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-1.5□□□□□ -2.65
CPS1P31327 AC024995.1-201ENST00000523014 93 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.5□□□□□ -2.65
CPS1P31327 TMF1P1-201ENST00000576058 373 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AC122133.1-201ENST00000613964 233 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AC009268.2-201ENST00000621925 457 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AC019226.1-201ENST00000625666 515 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 AL450472.1-202ENST00000637286 180 ntBASIC-1.5□□□□□ -2.65
CPS1P31327 RNU6-187P-201ENST00000384139 106 ntBASIC-1.51□□□□□ -2.65
CPS1P31327 RNU6-754P-201ENST00000391166 107 ntBASIC-1.51□□□□□ -2.65
CPS1P31327 AL953862.1-201ENST00000423016 168 ntBASIC-1.51□□□□□ -2.65
CPS1P31327 MTATP6P30-201ENST00000443540 664 ntBASIC-1.51□□□□□ -2.65
CPS1P31327 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-1.51□□□□□ -2.65
CPS1P31327 AC091885.1-201ENST00000506658 268 ntBASIC-1.51□□□□□ -2.65
CPS1P31327 AC110760.3-202ENST00000515177 371 ntBASIC-1.51□□□□□ -2.65
CPS1P31327 AL020997.3-201ENST00000602843 359 ntBASIC-1.51□□□□□ -2.65
CPS1P31327 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.51□□□□□ -2.65
CPS1P31327 AL590491.3-201ENST00000610731 82 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms