Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU6-222P-201ENST00000362438 107 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 RNU6-774P-201ENST00000363238 107 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 RNU6-1175P-201ENST00000365200 107 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 U3.15-201ENST00000365398 212 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 RNU6-805P-201ENST00000365643 106 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 MIR32-201ENST00000384965 70 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 AC078809.1-201ENST00000427601 140 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.9□□□□□ -1.95
POLR2AP24928 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.9□□□□□ -1.95
POLR2AP24928 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.9□□□□□ -1.95
POLR2AP24928 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.9□□□□□ -1.95
POLR2AP24928 RNA5SP458-201ENST00000516188 119 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 SNORA27.4-201ENST00000516650 95 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 SNORA31.16-201ENST00000516773 139 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 TCL6_2.1-201ENST00000615162 119 ntBASIC2.9□□□□□ -1.95
POLR2AP24928 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
POLR2AP24928 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
POLR2AP24928 Y_RNA.179-201ENST00000363844 90 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RNU6-740P-201ENST00000364734 105 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RNU4-9P-201ENST00000364951 139 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 Y_RNA.343-201ENST00000365354 112 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RNU6-102P-201ENST00000384485 104 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RNA5SP210-201ENST00000391034 120 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RNU2-51P-201ENST00000410708 197 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 TOMM22P1-201ENST00000418578 312 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 snoU13.4-201ENST00000458916 104 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 CBX3P4-201ENST00000538909 354 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.89□□□□□ -1.95
POLR2AP24928 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.89□□□□□ -1.95
POLR2AP24928 MIR3144-201ENST00000579460 79 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 U6.99-201ENST00000637524 83 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 ADAM3A-203ENST00000461344 2157 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
POLR2AP24928 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
POLR2AP24928 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
POLR2AP24928 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.89□□□□□ -1.95
POLR2AP24928 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.89□□□□□ -1.95
POLR2AP24928 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
POLR2AP24928 RNU4-17P-201ENST00000365598 141 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RNU6-142P-201ENST00000384019 107 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RNU6-959P-201ENST00000384671 107 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 AL023284.1-201ENST00000403956 276 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR2AP24928 AC125238.1-201ENST00000448842 249 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 HMGN2P23-201ENST00000456759 269 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 AL049830.2-201ENST00000480072 201 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 RPS29P20-201ENST00000489592 171 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 AC021269.2-201ENST00000532318 330 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 AL713866.2-201ENST00000603579 219 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.89□□□□□ -1.95
POLR2AP24928 AC046143.2-201ENST00000609789 160 ntBASIC2.89□□□□□ -1.95
POLR2AP24928 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.88□□□□□ -1.95
POLR2AP24928 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLR2AP24928 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLR2AP24928 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 RNY1-201ENST00000364228 113 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 SNORD113-1-201ENST00000365321 69 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 RNU6-47P-201ENST00000383866 107 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 RNU6-748P-201ENST00000384648 107 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 MIR329-1-201ENST00000385028 80 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 RNU6-493P-201ENST00000391321 108 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 AC099548.1-201ENST00000421443 426 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 BPY2DP-201ENST00000422208 265 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 AL590383.1-201ENST00000428602 75 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.88□□□□□ -1.95
POLR2AP24928 UQCRBP2-201ENST00000447827 297 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 AC087477.1-201ENST00000465747 340 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 Y_RNA.679-201ENST00000516416 91 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 RNU2-31P-201ENST00000516954 155 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLR2AP24928 AC233702.2-202ENST00000562547 291 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 AL078605.1-201ENST00000603529 500 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 MIR6076-201ENST00000617521 113 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 U6.106-201ENST00000636360 105 ntBASIC2.88□□□□□ -1.95
POLR2AP24928 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR2AP24928 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR2AP24928 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
POLR2AP24928 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.87□□□□□ -1.95
POLR2AP24928 MIR410-201ENST00000362222 80 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 RNU6-801P-201ENST00000364087 105 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 SNORA1.3-201ENST00000384676 136 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 CBX3P9-201ENST00000402326 552 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 RNA5SP390-201ENST00000410191 113 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 RPS26P42-201ENST00000413485 326 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR2AP24928 HMGN2P21-201ENST00000447764 270 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 AP000873.1-201ENST00000463987 400 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 NACAP3-201ENST00000552100 481 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 HMGB1P14-201ENST00000557424 591 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
POLR2AP24928 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.87□□□□□ -1.95
POLR2AP24928 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
POLR2AP24928 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR2AP24928 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms