Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
CDH3P22223 AC097473.1-201ENST00000508142 408 ntBASIC2.02□□□□□ -2.09
CDH3P22223 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH3P22223 RNU6-120P-201ENST00000516077 103 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.718-201ENST00000517110 102 ntBASIC2.02□□□□□ -2.09
CDH3P22223 AC027288.2-201ENST00000553028 243 ntBASIC2.02□□□□□ -2.09
CDH3P22223 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH3P22223 AC104581.2-201ENST00000572227 430 ntBASIC2.02□□□□□ -2.09
CDH3P22223 MIR5690-201ENST00000583739 73 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RMST_6.1-201ENST00000611980 203 ntBASIC2.02□□□□□ -2.09
CDH3P22223 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.02□□□□□ -2.09
CDH3P22223 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH3P22223 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
CDH3P22223 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH3P22223 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH3P22223 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH3P22223 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDH3P22223 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH3P22223 RNY1P16-201ENST00000363063 111 ntBASIC2.01□□□□□ -2.09
CDH3P22223 RNU6-743P-201ENST00000364151 106 ntBASIC2.01□□□□□ -2.09
CDH3P22223 SNORA18.2-201ENST00000383865 132 ntBASIC2.01□□□□□ -2.09
CDH3P22223 Y_RNA.384-201ENST00000383909 102 ntBASIC2.01□□□□□ -2.09
CDH3P22223 MT-TD-201ENST00000387419 68 ntBASIC2.01□□□□□ -2.09
CDH3P22223 SNORA40.19-201ENST00000390846 128 ntBASIC2.01□□□□□ -2.09
CDH3P22223 SNORA75.6-201ENST00000391318 127 ntBASIC2.01□□□□□ -2.09
CDH3P22223 MTCYBP4-201ENST00000401524 249 ntBASIC2.01□□□□□ -2.09
CDH3P22223 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH3P22223 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
CDH3P22223 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDH3P22223 AL035666.1-201ENST00000446195 348 ntBASIC2.01□□□□□ -2.09
CDH3P22223 snoU13.15-201ENST00000459407 104 ntBASIC2.01□□□□□ -2.09
CDH3P22223 TOMM22P6-201ENST00000465035 409 ntBASIC2.01□□□□□ -2.09
CDH3P22223 AC132942.1-201ENST00000486753 483 ntBASIC2.01□□□□□ -2.09
CDH3P22223 ATP5EP1-201ENST00000510257 156 ntBASIC2.01□□□□□ -2.09
CDH3P22223 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH3P22223 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.01□□□□□ -2.09
CDH3P22223 RNU6-1098P-201ENST00000516772 96 ntBASIC2.01□□□□□ -2.09
CDH3P22223 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH3P22223 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.01□□□□□ -2.09
CDH3P22223 MIR4795-201ENST00000584182 89 ntBASIC2.01□□□□□ -2.09
CDH3P22223 AC005899.2-201ENST00000584353 90 ntBASIC2.01□□□□□ -2.09
CDH3P22223 AC104984.5-201ENST00000586878 94 ntBASIC2.01□□□□□ -2.09
CDH3P22223 AL359697.1-201ENST00000624879 587 ntBASIC2.01□□□□□ -2.09
CDH3P22223 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.01□□□□□ -2.09
CDH3P22223 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.01□□□□□ -2.09
CDH3P22223 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CDH3P22223 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDH3P22223 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CDH3P22223 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDH3P22223 SNORD114-1-201ENST00000362705 72 ntBASIC2□□□□□ -2.09
CDH3P22223 RNU1-76P-201ENST00000362903 159 ntBASIC2□□□□□ -2.09
CDH3P22223 SNORD115-8-201ENST00000363856 82 ntBASIC2□□□□□ -2.09
CDH3P22223 SNORD115-38-201ENST00000365037 82 ntBASIC2□□□□□ -2.09
CDH3P22223 RNU6-890P-201ENST00000384121 107 ntBASIC2□□□□□ -2.09
CDH3P22223 MIR153-2-201ENST00000385225 87 ntBASIC2□□□□□ -2.09
CDH3P22223 AC004866.1-201ENST00000411748 78 ntBASIC2□□□□□ -2.09
CDH3P22223 AC027124.2-201ENST00000428249 105 ntBASIC2□□□□□ -2.09
CDH3P22223 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2□□□□□ -2.09
CDH3P22223 ELOCP24-201ENST00000456370 334 ntBASIC2□□□□□ -2.09
CDH3P22223 RPL30P15-201ENST00000457129 321 ntBASIC2□□□□□ -2.09
CDH3P22223 PRELID3BP1-201ENST00000457142 540 ntBASIC2□□□□□ -2.09
CDH3P22223 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2□□□□□ -2.09
CDH3P22223 Y_RNA.653-201ENST00000459091 95 ntBASIC2□□□□□ -2.09
CDH3P22223 SNORD19B-201ENST00000459623 84 ntBASIC2□□□□□ -2.09
CDH3P22223 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
CDH3P22223 MIR4299-201ENST00000577899 72 ntBASIC2□□□□□ -2.09
CDH3P22223 AL355802.3-201ENST00000607571 545 ntBASIC2□□□□□ -2.09
CDH3P22223 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2□□□□□ -2.09
CDH3P22223 MIR6715A-201ENST00000615929 79 ntBASIC2□□□□□ -2.09
CDH3P22223 AC005562.2-201ENST00000618264 111 ntBASIC2□□□□□ -2.09
CDH3P22223 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2□□□□□ -2.09
CDH3P22223 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CDH3P22223 RNU6-874P-201ENST00000362390 105 ntBASIC1.99□□□□□ -2.09
CDH3P22223 RNU4-79P-201ENST00000362764 141 ntBASIC1.99□□□□□ -2.09
CDH3P22223 Y_RNA.259-201ENST00000364619 101 ntBASIC1.99□□□□□ -2.09
CDH3P22223 Y_RNA.319-201ENST00000365138 92 ntBASIC1.99□□□□□ -2.09
CDH3P22223 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
CDH3P22223 MIR1262-201ENST00000408276 93 ntBASIC1.99□□□□□ -2.09
CDH3P22223 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
CDH3P22223 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH3P22223 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH3P22223 AC093259.1-201ENST00000509755 300 ntBASIC1.99□□□□□ -2.09
CDH3P22223 RNU7-175P-201ENST00000515915 61 ntBASIC1.99□□□□□ -2.09
CDH3P22223 RNU6-991P-201ENST00000516168 107 ntBASIC1.99□□□□□ -2.09
CDH3P22223 RNU6-307P-201ENST00000516743 106 ntBASIC1.99□□□□□ -2.09
CDH3P22223 RNU6-58P-201ENST00000517143 103 ntBASIC1.99□□□□□ -2.09
CDH3P22223 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.99□□□□□ -2.09
CDH3P22223 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.99□□□□□ -2.09
CDH3P22223 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
CDH3P22223 C8orf59P2-201ENST00000603441 271 ntBASIC1.99□□□□□ -2.09
CDH3P22223 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
CDH3P22223 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH3P22223 BX322639.1-202ENST00000423987 2213 ntBASIC1.99□□□□□ -2.09
CDH3P22223 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH3P22223 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CDH3P22223 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CDH3P22223 ZNF204P-201ENST00000416749 2397 ntBASIC1.98□□□□□ -2.09
CDH3P22223 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH3P22223 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CDH3P22223 AL079342.1-201ENST00000401460 267 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms