Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MIR549A-201ENST00000385268 96 ntBASIC1.68□□□□□ -2.14
VCLP18206 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
VCLP18206 RNA5SP118-201ENST00000410385 109 ntBASIC1.68□□□□□ -2.14
VCLP18206 RNU2-7P-201ENST00000410794 178 ntBASIC1.68□□□□□ -2.14
VCLP18206 AL589823.1-201ENST00000429577 183 ntBASIC1.68□□□□□ -2.14
VCLP18206 RNU6-1041P-201ENST00000516254 102 ntBASIC1.68□□□□□ -2.14
VCLP18206 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.68□□□□□ -2.14
VCLP18206 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.68□□□□□ -2.14
VCLP18206 AC104581.2-201ENST00000572227 430 ntBASIC1.68□□□□□ -2.14
VCLP18206 MIR3683-201ENST00000580847 82 ntBASIC1.68□□□□□ -2.14
VCLP18206 AP003465.2-201ENST00000602571 373 ntBASIC1.68□□□□□ -2.14
VCLP18206 AC124303.1-201ENST00000605703 360 ntBASIC1.68□□□□□ -2.14
VCLP18206 MIR8074-201ENST00000615081 81 ntBASIC1.68□□□□□ -2.14
VCLP18206 AC006504.8-201ENST00000621046 635 ntBASIC1.68□□□□□ -2.14
VCLP18206 ZNF204P-201ENST00000416749 2397 ntBASIC1.67□□□□□ -2.14
VCLP18206 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.67□□□□□ -2.14
VCLP18206 Y_RNA.135-201ENST00000363439 95 ntBASIC1.67□□□□□ -2.14
VCLP18206 RNU1-96P-201ENST00000364163 162 ntBASIC1.67□□□□□ -2.14
VCLP18206 Y_RNA.212-201ENST00000364177 102 ntBASIC1.67□□□□□ -2.14
VCLP18206 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
VCLP18206 Y_RNA.453-201ENST00000384223 109 ntBASIC1.67□□□□□ -2.14
VCLP18206 MIR520A-201ENST00000384862 85 ntBASIC1.67□□□□□ -2.14
VCLP18206 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VCLP18206 MIR934-201ENST00000401241 83 ntBASIC1.67□□□□□ -2.14
VCLP18206 AL358453.1-201ENST00000422522 250 ntBASIC1.67□□□□□ -2.14
VCLP18206 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.67□□□□□ -2.14
VCLP18206 HMGN2P23-201ENST00000456759 269 ntBASIC1.67□□□□□ -2.14
VCLP18206 RNU1-98P-201ENST00000458992 160 ntBASIC1.67□□□□□ -2.14
VCLP18206 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
VCLP18206 7SK.7-201ENST00000603504 247 ntBASIC1.67□□□□□ -2.14
VCLP18206 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.67□□□□□ -2.14
VCLP18206 AC090617.10-201ENST00000624308 134 ntBASIC1.67□□□□□ -2.14
VCLP18206 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.67□□□□□ -2.14
VCLP18206 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
VCLP18206 RNU6-1305P-201ENST00000364353 104 ntBASIC1.66□□□□□ -2.14
VCLP18206 RNU6-1019P-201ENST00000364424 107 ntBASIC1.66□□□□□ -2.14
VCLP18206 Y_RNA.295-201ENST00000364918 102 ntBASIC1.66□□□□□ -2.14
VCLP18206 RNU6-1013P-201ENST00000384180 107 ntBASIC1.66□□□□□ -2.14
VCLP18206 RNU6-975P-201ENST00000384296 105 ntBASIC1.66□□□□□ -2.14
VCLP18206 RNU6-1235P-201ENST00000384559 107 ntBASIC1.66□□□□□ -2.14
VCLP18206 MIR764-201ENST00000390811 85 ntBASIC1.66□□□□□ -2.14
VCLP18206 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.66□□□□□ -2.14
VCLP18206 CYCSP49-201ENST00000420810 319 ntBASIC1.66□□□□□ -2.14
VCLP18206 AC060773.1-201ENST00000421698 310 ntBASIC1.66□□□□□ -2.14
VCLP18206 AL513185.2-201ENST00000425543 193 ntBASIC1.66□□□□□ -2.14
VCLP18206 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.66□□□□□ -2.14
VCLP18206 AC079354.2-201ENST00000453523 154 ntBASIC1.66□□□□□ -2.14
VCLP18206 RNU6-498P-201ENST00000459468 107 ntBASIC1.66□□□□□ -2.14
VCLP18206 RPL36AP21-201ENST00000490372 323 ntBASIC1.66□□□□□ -2.14
VCLP18206 AC025465.3-201ENST00000510570 311 ntBASIC1.66□□□□□ -2.14
VCLP18206 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.66□□□□□ -2.14
VCLP18206 AC011406.1-201ENST00000512440 370 ntBASIC1.66□□□□□ -2.14
VCLP18206 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
VCLP18206 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.66□□□□□ -2.14
VCLP18206 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
VCLP18206 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
VCLP18206 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.66□□□□□ -2.14
VCLP18206 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
VCLP18206 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
VCLP18206 AC100810.6-201ENST00000638068 285 ntBASIC1.66□□□□□ -2.14
VCLP18206 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.66□□□□□ -2.14
VCLP18206 AC010615.1-201ENST00000594254 1764 ntBASIC1.66□□□□□ -2.14
VCLP18206 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.65□□□□□ -2.14
VCLP18206 Y_RNA.157-201ENST00000363638 102 ntBASIC1.65□□□□□ -2.15
VCLP18206 RNU6-414P-201ENST00000363705 104 ntBASIC1.65□□□□□ -2.15
VCLP18206 RNA5SP190-201ENST00000365222 118 ntBASIC1.65□□□□□ -2.15
VCLP18206 RNU6-1215P-201ENST00000384441 102 ntBASIC1.65□□□□□ -2.15
VCLP18206 Y_RNA.516-201ENST00000384541 124 ntBASIC1.65□□□□□ -2.15
VCLP18206 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
VCLP18206 MIR32-201ENST00000384965 70 ntBASIC1.65□□□□□ -2.15
VCLP18206 MIR586-201ENST00000385035 97 ntBASIC1.65□□□□□ -2.15
VCLP18206 RNU6-482P-201ENST00000391068 107 ntBASIC1.65□□□□□ -2.15
VCLP18206 AC099677.2-201ENST00000436385 175 ntBASIC1.65□□□□□ -2.15
VCLP18206 MTND4LP16-201ENST00000440828 295 ntBASIC1.65□□□□□ -2.15
VCLP18206 AC027575.1-201ENST00000481064 460 ntBASIC1.65□□□□□ -2.15
VCLP18206 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.65□□□□□ -2.15
VCLP18206 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.65□□□□□ -2.15
VCLP18206 RNA5SP384-201ENST00000516615 116 ntBASIC1.65□□□□□ -2.15
VCLP18206 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VCLP18206 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.65□□□□□ -2.15
VCLP18206 SNORA59B-202ENST00000578183 701 ntBASIC1.65□□□□□ -2.15
VCLP18206 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.65□□□□□ -2.15
VCLP18206 ZNF72P-201ENST00000425869 1908 ntBASIC1.64□□□□□ -2.15
VCLP18206 MIR424-201ENST00000362227 98 ntBASIC1.64□□□□□ -2.15
VCLP18206 SNORD115-32-201ENST00000364079 82 ntBASIC1.64□□□□□ -2.15
VCLP18206 RNU6-245P-201ENST00000384020 107 ntBASIC1.64□□□□□ -2.15
VCLP18206 U8.10-201ENST00000384260 133 ntBASIC1.64□□□□□ -2.15
VCLP18206 RNU6-541P-201ENST00000384709 110 ntBASIC1.64□□□□□ -2.15
VCLP18206 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.64□□□□□ -2.15
VCLP18206 FTH1P12-201ENST00000432137 551 ntBASIC1.64□□□□□ -2.15
VCLP18206 UBE2V1P8-201ENST00000437166 265 ntBASIC1.64□□□□□ -2.15
VCLP18206 MTND1P34-201ENST00000438556 671 ntBASIC1.64□□□□□ -2.15
VCLP18206 AC069257.2-201ENST00000441819 155 ntBASIC1.64□□□□□ -2.15
VCLP18206 AC016717.1-201ENST00000448918 286 ntBASIC1.64□□□□□ -2.15
VCLP18206 snoU13.30-201ENST00000458951 104 ntBASIC1.64□□□□□ -2.15
VCLP18206 HMGN2P9-201ENST00000476875 229 ntBASIC1.64□□□□□ -2.15
VCLP18206 MTCYBP18-201ENST00000501056 747 ntBASIC1.64□□□□□ -2.15
VCLP18206 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
VCLP18206 RNU6-1146P-201ENST00000516282 102 ntBASIC1.64□□□□□ -2.15
VCLP18206 RNU6-344P-201ENST00000516635 111 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms