Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC010095.1-201ENST00000443543 144 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 AL357134.1-201ENST00000445848 426 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 PPP1R2P5-201ENST00000457256 603 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 snoU13.15-201ENST00000459407 104 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 AC107393.1-201ENST00000512403 346 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 RNA5SP182-201ENST00000516064 82 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 Y_RNA.682-201ENST00000516457 100 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 RNU1-54P-201ENST00000517181 120 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 MIR4790-201ENST00000577799 79 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 MIR5696-201ENST00000578474 85 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 MIR4742-201ENST00000581069 85 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 MIR4273-201ENST00000582824 84 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.89□□□□□ -2.11
ERCC2P18074 AL133216.2-202ENST00000634512 349 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 CASC19-280ENST00000642102 1351 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 SNORD115-32-201ENST00000364079 82 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 MIR320B2-201ENST00000408479 138 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 AL139396.1-201ENST00000421137 167 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 USP9YP30-201ENST00000430729 455 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 snoU13.30-201ENST00000458951 104 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.88□□□□□ -2.11
ERCC2P18074 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 AC067942.3-201ENST00000512025 362 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 RNA5SP54-201ENST00000516951 92 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.88□□□□□ -2.11
ERCC2P18074 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.88□□□□□ -2.11
ERCC2P18074 SUB1P4-201ENST00000566062 339 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 MIR5094-201ENST00000578766 85 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.88□□□□□ -2.11
ERCC2P18074 AC011712.1-201ENST00000588959 234 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 AL359697.1-201ENST00000624879 587 ntBASIC1.88□□□□□ -2.11
ERCC2P18074 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.88□□□□□ -2.11
ERCC2P18074 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
ERCC2P18074 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ERCC2P18074 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ERCC2P18074 RNU6-1305P-201ENST00000364353 104 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 RNU6-596P-201ENST00000365395 98 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 Y_RNA.533-201ENST00000384596 114 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 RNU6-174P-201ENST00000410406 106 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 MTND3P8-201ENST00000412909 339 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 NCOR1P3-201ENST00000420479 303 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 MTND1P2-201ENST00000430604 821 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 AC016717.1-201ENST00000448918 286 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 ATP5J2P3-201ENST00000451550 258 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.87□□□□□ -2.11
ERCC2P18074 RPL30P10-201ENST00000488148 337 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 MTND5P5-201ENST00000503764 376 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
ERCC2P18074 RNU6-856P-201ENST00000516959 98 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.87□□□□□ -2.11
ERCC2P18074 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
ERCC2P18074 AL158827.2-201ENST00000602494 330 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 AC010900.2-201ENST00000604508 210 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 AL691447.3-201ENST00000635020 330 ntBASIC1.87□□□□□ -2.11
ERCC2P18074 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
ERCC2P18074 Y_RNA.72-201ENST00000362894 103 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 SNORD115-8-201ENST00000363856 82 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 SNORD115-38-201ENST00000365037 82 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 Y_RNA.319-201ENST00000365138 92 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 MIR153-2-201ENST00000385225 87 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 AC243428.1-201ENST00000421099 264 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 AC060773.1-201ENST00000421698 310 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.86□□□□□ -2.11
ERCC2P18074 HMGN2P9-201ENST00000476875 229 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 AC010409.1-201ENST00000487382 476 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 RNU6-1041P-201ENST00000516254 102 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 RNU6-58P-201ENST00000517143 103 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.86□□□□□ -2.11
ERCC2P18074 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.86□□□□□ -2.11
ERCC2P18074 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.86□□□□□ -2.11
ERCC2P18074 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
ERCC2P18074 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 Y_RNA.160-201ENST00000363677 92 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 RNU6-842P-201ENST00000384269 107 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 RNU6-975P-201ENST00000384296 105 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 U8.13-201ENST00000390842 128 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 RNU6-876P-201ENST00000391295 104 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 AL445305.1-201ENST00000432577 575 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.85□□□□□ -2.11
ERCC2P18074 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.85□□□□□ -2.11
ERCC2P18074 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 AC116337.1-201ENST00000509680 687 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 RNU6-948P-201ENST00000516374 107 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 RNU6-1198P-201ENST00000516904 67 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 GNAI2P1-201ENST00000541815 315 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 AC027288.2-201ENST00000553028 243 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.85□□□□□ -2.11
ERCC2P18074 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
ERCC2P18074 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 SNORA67.2-201ENST00000384300 149 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 MIR586-201ENST00000385035 97 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ERCC2P18074 MIR548F5-201ENST00000408421 86 ntBASIC1.84□□□□□ -2.11
ERCC2P18074 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms