Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 Y_RNA.101-201ENST00000363154 102 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 DYNLT3P1-201ENST00000378574 347 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 SNORA18.2-201ENST00000383865 132 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 SNORA44-201ENST00000384584 132 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 AC004866.1-201ENST00000411748 78 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN1P18031 EIF4EP4-201ENST00000424916 578 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN1P18031 RN7SL75P-201ENST00000461926 281 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN1P18031 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN1P18031 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN1P18031 DEFB131C-201ENST00000528817 165 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 RPL21P9-201ENST00000556149 474 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 MIR5006-201ENST00000583027 110 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 MIR4765-201ENST00000585007 77 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN1P18031 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN1P18031 SNORD11B-201ENST00000607707 90 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 FTX_2.1-201ENST00000618816 94 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 AC110079.1-202ENST00000635213 138 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPN1P18031 AC093831.2-201ENST00000624393 3427 ntBASIC3.18□□□□□ -1.9
PTPN1P18031 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN1P18031 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PTPN1P18031 Y_RNA.555-201ENST00000384673 110 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 Y_RNA.590-201ENST00000410140 107 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 RNA5SP475-201ENST00000410568 110 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPN1P18031 AC009237.7-201ENST00000447357 229 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 NDUFB4P10-201ENST00000452541 359 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN1P18031 RNU6-155P-201ENST00000516347 100 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 RNU6-966P-201ENST00000516479 104 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 SNORA27.4-201ENST00000516650 95 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 HSPE1P18-201ENST00000517602 280 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPN1P18031 AP002001.1-203ENST00000534002 267 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN1P18031 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN1P18031 AL670379.2-201ENST00000604983 252 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 AC093732.2-201ENST00000607950 274 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
PTPN1P18031 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN1P18031 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN1P18031 AC092593.1-201ENST00000515413 1815 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN1P18031 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN1P18031 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN1P18031 MIR411-201ENST00000362239 96 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 Y_RNA.122-201ENST00000363331 96 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 RNU2-54P-201ENST00000410299 190 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 RNU2-61P-201ENST00000411069 191 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 Y_RNA.793-201ENST00000411222 111 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 SUMO1P3-201ENST00000439961 304 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 Y_RNA.644-201ENST00000459006 113 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 AP001486.1-201ENST00000463339 476 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 RNA5SP112-201ENST00000515937 99 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 Y_RNA.674-201ENST00000516362 113 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 Y_RNA.679-201ENST00000516416 91 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 RNU6-107P-201ENST00000516643 102 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 RNU2-44P-201ENST00000516795 194 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN1P18031 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN1P18031 AC103810.1-201ENST00000579873 453 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 AL512605.2-201ENST00000592972 256 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 UCA1.1-201ENST00000620952 75 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 AC068205.3-201ENST00000636385 468 ntBASIC3.16□□□□□ -1.9
PTPN1P18031 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN1P18031 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
PTPN1P18031 AL035425.3-201ENST00000564206 4996 ntBASIC3.15□□□□□ -1.9
PTPN1P18031 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PTPN1P18031 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN1P18031 Y_RNA.292-201ENST00000364904 97 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 RNY4P28-201ENST00000365281 93 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 RNU6-1264P-201ENST00000383891 107 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 RNU6-1062P-201ENST00000383908 107 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 RNU6-1083P-201ENST00000384022 107 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 MIR634-201ENST00000385208 97 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 SNORA12-201ENST00000391162 147 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 RNU1-101P-201ENST00000391171 127 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 RNU6-651P-201ENST00000411040 105 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 RNU6-1199P-201ENST00000411249 104 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 Y_RNA.626-201ENST00000411288 95 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 AC009963.1-201ENST00000417265 157 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 SUMO1P2-201ENST00000452524 304 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN1P18031 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPN1P18031 COX6CP14-201ENST00000469580 174 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 AL049873.1-201ENST00000480540 376 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN1P18031 MRPS36P2-201ENST00000512569 299 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 MIR4282-201ENST00000583613 67 ntBASIC3.15□□□□□ -1.91
PTPN1P18031 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms