Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC087499.7-201ENST00000441958 109 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 RNU4-49P-201ENST00000516080 140 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 RNU6-714P-201ENST00000516963 103 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.96□□□□□ -2.56
HMGA1P17096 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.96□□□□□ -2.56
HMGA1P17096 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.96□□□□□ -2.56
HMGA1P17096 SNORA25.7-201ENST00000364375 127 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 SNORD113.3-201ENST00000364630 78 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AC083799.1-201ENST00000366451 910 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.97□□□□□ -2.56
HMGA1P17096 AC092170.1-201ENST00000440211 356 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.97□□□□□ -2.56
HMGA1P17096 USP9YP25-201ENST00000457708 443 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AC116562.3-201ENST00000506136 177 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 RNU6-782P-201ENST00000516852 104 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.97□□□□□ -2.56
HMGA1P17096 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.97□□□□□ -2.56
HMGA1P17096 BNIP3P26-201ENST00000600827 554 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AC022217.4-201ENST00000604389 163 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AC246785.4-201ENST00000605374 287 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 AC091946.2-201ENST00000606105 291 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.97□□□□□ -2.56
HMGA1P17096 SMIM11P1-201ENST00000369586 178 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 RNU6-417P-201ENST00000384712 107 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 RNU6-440P-201ENST00000390882 105 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.98□□□□□ -2.57
HMGA1P17096 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.98□□□□□ -2.57
HMGA1P17096 ZNF321P-202ENST00000550843 495 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.98□□□□□ -2.57
HMGA1P17096 AL162424.1-201ENST00000602325 221 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 AC004987.4-201ENST00000603383 338 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 AL136363.2-201ENST00000604173 851 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 AC018889.1-201ENST00000605372 397 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 AC104073.3-201ENST00000610942 955 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 AL355073.2-201ENST00000612106 557 ntBASIC-0.98□□□□□ -2.57
HMGA1P17096 RNU6-369P-201ENST00000362515 102 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 snoZ40.1-201ENST00000364540 72 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 MTND4P25-201ENST00000441039 533 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 AC109327.2-201ENST00000448339 378 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 RNU6-977P-201ENST00000516411 103 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.99□□□□□ -2.57
HMGA1P17096 TMF1P1-201ENST00000576058 373 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 MIR4263-201ENST00000584745 83 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 AC096586.1-201ENST00000610267 561 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 MIR6738-201ENST00000619620 64 ntBASIC-0.99□□□□□ -2.57
HMGA1P17096 SNORD114-14-201ENST00000362723 75 ntBASIC-1□□□□□ -2.57
HMGA1P17096 snoU2-30.2-201ENST00000362805 70 ntBASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-97P-201ENST00000363387 104 ntBASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-891P-201ENST00000384280 111 ntBASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-1005P-201ENST00000384519 107 ntBASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-1025P-201ENST00000410629 104 ntBASIC-1□□□□□ -2.57
HMGA1P17096 CDK8P2-201ENST00000415020 547 ntBASIC-1□□□□□ -2.57
HMGA1P17096 AC245047.3-201ENST00000429428 127 ntBASIC-1□□□□□ -2.57
HMGA1P17096 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-848P-201ENST00000515948 107 ntBASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-617P-201ENST00000516147 107 ntBASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-473P-201ENST00000516164 107 ntBASIC-1□□□□□ -2.57
HMGA1P17096 RNU6-1049P-201ENST00000516414 107 ntBASIC-1□□□□□ -2.57
HMGA1P17096 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1□□□□□ -2.57
HMGA1P17096 AC013828.2-201ENST00000532487 235 ntBASIC-1□□□□□ -2.57
HMGA1P17096 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1□□□□□ -2.57
HMGA1P17096 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1□□□□□ -2.57
HMGA1P17096 AL157871.3-201ENST00000557231 293 ntBASIC-1□□□□□ -2.57
HMGA1P17096 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 MIR587-201ENST00000384845 96 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 MIR301A-201ENST00000385261 86 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 RNU6-564P-201ENST00000410983 104 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.01□□□□□ -2.57
HMGA1P17096 AC005002.2-201ENST00000438228 269 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.01□□□□□ -2.57
HMGA1P17096 AC006026.2-201ENST00000457376 180 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 U8.21-201ENST00000459536 136 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 AC022616.3-201ENST00000523940 148 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 LRRC6P1-201ENST00000532188 885 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 BNIP3P9-201ENST00000603714 553 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 AL359075.3-201ENST00000613288 217 ntBASIC-1.01□□□□□ -2.57
HMGA1P17096 SNORA36.1-201ENST00000363424 132 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 AL049545.1-201ENST00000401856 572 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.02□□□□□ -2.57
HMGA1P17096 AC093303.1-201ENST00000514549 295 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 RNU2-46P-201ENST00000517038 113 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 AP003716.2-201ENST00000528260 108 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.02□□□□□ -2.57
HMGA1P17096 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.02□□□□□ -2.57
HMGA1P17096 AC012507.3-201ENST00000603556 477 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 AL450472.1-202ENST00000637286 180 ntBASIC-1.02□□□□□ -2.57
HMGA1P17096 SNORD83B-201ENST00000386745 93 ntBASIC-1.03□□□□□ -2.57
HMGA1P17096 SNORA3B-201ENST00000391305 131 ntBASIC-1.03□□□□□ -2.57
HMGA1P17096 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms