Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RNU6-1158P-201ENST00000391167 107 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.79□□□□□ -2.28
CTLA4P16410 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.79□□□□□ -2.28
CTLA4P16410 AC016717.1-201ENST00000448918 286 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 RPS26P45-201ENST00000471748 340 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 RNU6-189P-201ENST00000516120 101 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 RNU6-1069P-201ENST00000516612 133 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AC024995.1-201ENST00000523014 93 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 FGF7P1-201ENST00000582820 288 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AL391646.1-201ENST00000603860 190 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AP000907.4-201ENST00000604143 237 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AC087752.4-201ENST00000605911 462 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AC004492.1-201ENST00000607036 742 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AL365434.2-201ENST00000607979 234 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AC064836.2-201ENST00000609491 462 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AL354950.2-201ENST00000617939 290 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 AC009509.4-201ENST00000619202 509 ntBASIC0.79□□□□□ -2.28
CTLA4P16410 RNU6-1123P-201ENST00000362347 106 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 RNA5SP432-201ENST00000362480 116 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 Y_RNA.169-201ENST00000363745 96 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 RNU6-1329P-201ENST00000365664 107 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CTLA4P16410 AL049545.1-201ENST00000401856 572 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 RN7SKP142-201ENST00000411236 328 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 MTCO2P19-201ENST00000427513 598 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 MTND3P9-201ENST00000429526 346 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 AC073464.1-201ENST00000429823 534 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 AC074290.1-201ENST00000448883 135 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 MTCO3P8-201ENST00000453691 755 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 HMGN1P12-201ENST00000499125 195 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.78□□□□□ -2.28
CTLA4P16410 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 LRRC34P1-201ENST00000542742 915 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 SCOCP1-201ENST00000554676 349 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.78□□□□□ -2.28
CTLA4P16410 MIR3664-201ENST00000579074 99 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 SNRPGP20-201ENST00000604477 205 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 AC040896.1-201ENST00000613819 479 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.78□□□□□ -2.28
CTLA4P16410 AL133216.2-202ENST00000634512 349 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 MTND4P5-201ENST00000435821 1374 ntBASIC0.78□□□□□ -2.28
CTLA4P16410 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CTLA4P16410 SNORA33-201ENST00000363664 130 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 SNORD114-27-201ENST00000363766 70 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 RNU6-1317P-201ENST00000364582 104 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 Y_RNA.287-201ENST00000364853 94 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 RNU6-1080P-201ENST00000383982 107 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 SNORA25-201ENST00000384384 134 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 RNU6-950P-201ENST00000384651 107 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CTLA4P16410 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CTLA4P16410 AC004866.1-201ENST00000411748 78 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.77□□□□□ -2.29
CTLA4P16410 MTND2P9-201ENST00000422293 931 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.77□□□□□ -2.29
CTLA4P16410 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.77□□□□□ -2.29
CTLA4P16410 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.77□□□□□ -2.29
CTLA4P16410 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.77□□□□□ -2.29
CTLA4P16410 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.77□□□□□ -2.29
CTLA4P16410 TPTE2P5-203ENST00000458118 728 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
CTLA4P16410 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.77□□□□□ -2.29
CTLA4P16410 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.77□□□□□ -2.29
CTLA4P16410 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.77□□□□□ -2.29
CTLA4P16410 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.77□□□□□ -2.29
CTLA4P16410 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.77□□□□□ -2.29
CTLA4P16410 AC145350.1-201ENST00000567426 208 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 AC136932.1-201ENST00000574771 208 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 MIR3124-201ENST00000582636 67 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 AC016727.1-205ENST00000605437 569 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 AC139792.3-201ENST00000623525 224 ntBASIC0.77□□□□□ -2.29
CTLA4P16410 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.77□□□□□ -2.29
CTLA4P16410 SNORA67.2-201ENST00000384300 149 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 RNU6-417P-201ENST00000384712 107 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 MIR549A-201ENST00000385268 96 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CTLA4P16410 AL353193.1-201ENST00000421444 268 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 USP9YP29-201ENST00000445112 563 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 RNU7-34P-201ENST00000459394 64 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 RNU7-57P-201ENST00000459540 60 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 HMGB1P29-201ENST00000505659 499 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 RNU6-1053P-201ENST00000515930 101 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 RN7SKP88-201ENST00000516847 250 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CTLA4P16410 MRPS36P4-201ENST00000534436 298 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.76□□□□□ -2.29
CTLA4P16410 Z99497.2-201ENST00000603634 310 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 BX284668.6-201ENST00000606899 438 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 7SK.8-201ENST00000612110 250 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.76□□□□□ -2.29
CTLA4P16410 7SK.11-201ENST00000615477 250 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 AC137590.2-201ENST00000619709 240 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 7SK.13-201ENST00000622040 250 ntBASIC0.76□□□□□ -2.29
CTLA4P16410 Y_RNA.123-201ENST00000363338 102 ntBASIC0.75□□□□□ -2.29
CTLA4P16410 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
CTLA4P16410 RNU6-1305P-201ENST00000364353 104 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms