| MUC1 | P15941 | MIR340-201 | ENST00000362125 | 95 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | Y_RNA.99-201 | ENST00000363138 | 105 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-1059P-201 | ENST00000363752 | 98 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | Y_RNA.332-201 | ENST00000365271 | 113 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | SNORA18.2-201 | ENST00000383865 | 132 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU11-3P-201 | ENST00000391111 | 133 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | 5S_rRNA.2-201 | ENST00000391293 | 112 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC007098.1-201 | ENST00000420122 | 367 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | Z82188.1-201 | ENST00000436709 | 154 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | SNRPEP8-201 | ENST00000442866 | 260 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | LINC01710-201 | ENST00000446002 | 390 nt | TSL 5 BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MTND1P17-201 | ENST00000448961 | 204 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RPS29P23-201 | ENST00000458635 | 123 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU7-14P-201 | ENST00000459331 | 62 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC087477.1-201 | ENST00000465747 | 340 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC018710.1-201 | ENST00000506509 | 158 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | Y_RNA.682-201 | ENST00000516457 | 100 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | LINC02055-204 | ENST00000521034 | 432 nt | TSL 5 BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | GNAI2P1-201 | ENST00000541815 | 315 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | ACTG1P17-203 | ENST00000561222 | 537 nt | TSL 3 BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR3198-2-201 | ENST00000577868 | 80 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR4742-201 | ENST00000581069 | 85 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | DSCR8-208 | ENST00000614538 | 403 nt | APPRIS P5 TSL 5 BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL353997.5-201 | ENST00000618886 | 171 nt | BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | BRDT-206 | ENST00000402388 | 3125 nt | APPRIS P3 TSL 1 (best) BASIC | 1.27 | □□□□□ -2.21 | | |
| MUC1 | P15941 | CASC19-280 | ENST00000642102 | 1351 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU1-62P-201 | ENST00000362599 | 164 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-60P-201 | ENST00000364792 | 103 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-1013P-201 | ENST00000384180 | 107 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | TRAJ6-201 | ENST00000390531 | 62 nt | APPRIS P1 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-482P-201 | ENST00000391068 | 107 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL357139.1-201 | ENST00000407792 | 426 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR1304-201 | ENST00000408243 | 91 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | DAP3P1-201 | ENST00000441522 | 278 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC145146.2-202 | ENST00000508118 | 326 nt | TSL 3 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC091976.1-202 | ENST00000509211 | 630 nt | TSL 3 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU5F-4P-201 | ENST00000516581 | 114 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC100801.1-202 | ENST00000518266 | 371 nt | TSL 3 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AP005660.1-201 | ENST00000522972 | 293 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL121821.1-201 | ENST00000557067 | 530 nt | TSL 3 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC009754.1-201 | ENST00000566282 | 540 nt | TSL 4 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL589935.1-202 | ENST00000612512 | 393 nt | TSL 5 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR6128-201 | ENST00000615528 | 109 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | KCNQ1OT1_3.1-201 | ENST00000616504 | 116 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | ST7-OT4_2.1-201 | ENST00000619089 | 172 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL807742.1-203 | ENST00000637444 | 759 nt | TSL 5 BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | ZNF72P-201 | ENST00000425869 | 1908 nt | BASIC | 1.26 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MGAT4C-207 | ENST00000552808 | 1937 nt | APPRIS P1 TSL 2 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | GAGE12B-201 | ENST00000361446 | 117 nt | APPRIS P1 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU1-58P-201 | ENST00000362413 | 163 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU1-76P-201 | ENST00000362903 | 159 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | U8.10-201 | ENST00000384260 | 133 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | Y_RNA.473-201 | ENST00000384333 | 102 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR29C-201 | ENST00000385231 | 88 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-955P-201 | ENST00000410497 | 104 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC004866.1-201 | ENST00000411748 | 78 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MTND3P8-201 | ENST00000412909 | 339 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC079150.1-201 | ENST00000413043 | 383 nt | TSL 3 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | LINC01853-201 | ENST00000417715 | 444 nt | TSL 3 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MTND1P2-201 | ENST00000430604 | 821 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | USP9YP30-201 | ENST00000430729 | 455 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MTATP6P13-201 | ENST00000438531 | 667 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL035666.1-201 | ENST00000446195 | 348 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | OR2AQ1P-201 | ENST00000451972 | 200 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RPS23P5-201 | ENST00000495419 | 428 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MTND5P5-201 | ENST00000503764 | 376 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC026765.1-201 | ENST00000547876 | 435 nt | TSL 3 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL157688.1-201 | ENST00000555990 | 369 nt | TSL 3 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC009107.1-201 | ENST00000561923 | 330 nt | TSL 3 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR4790-201 | ENST00000577799 | 79 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AL590240.4-201 | ENST00000616908 | 390 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MESTIT1_1.1-201 | ENST00000618871 | 140 nt | BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | NCBP1-205 | ENST00000629069 | 249 nt | TSL 5 BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | CYSLTR1-201 | ENST00000373304 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 1.25 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AGR3-201 | ENST00000310398 | 749 nt | APPRIS P1 TSL 1 (best) BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-545P-201 | ENST00000362681 | 104 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU1-42P-201 | ENST00000364033 | 160 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-842P-201 | ENST00000384269 | 107 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | SNORA40.19-201 | ENST00000390846 | 128 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RNU6-510P-201 | ENST00000391239 | 108 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | RPS26P42-201 | ENST00000413485 | 326 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | PLCL2-AS1-201 | ENST00000414844 | 311 nt | TSL 2 BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC123900.1-201 | ENST00000420390 | 96 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | LINC01344-201 | ENST00000420760 | 261 nt | TSL 3 BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC139712.2-201 | ENST00000424302 | 339 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC004386.2-201 | ENST00000441858 | 148 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MTCO3P8-201 | ENST00000453691 | 755 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC069528.1-201 | ENST00000490344 | 705 nt | TSL 3 BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC096711.1-201 | ENST00000510967 | 347 nt | TSL 5 BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | ACA59.1-201 | ENST00000515966 | 143 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC022690.2-201 | ENST00000525673 | 589 nt | TSL 3 BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC087441.2-201 | ENST00000529141 | 262 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC002558.3-201 | ENST00000574021 | 401 nt | TSL 3 BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR3169-201 | ENST00000578032 | 83 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | MIR5696-201 | ENST00000578474 | 85 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | AC011712.1-201 | ENST00000588959 | 234 nt | BASIC | 1.24 | □□□□□ -2.21 | | |
| MUC1 | P15941 | PRR13P7-201 | ENST00000605538 | 430 nt | BASIC | 1.24 | □□□□□ -2.21 | | |