Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR1263-201ENST00000408324 86 ntBASIC3.68□□□□□ -1.82
NID1P14543 HMGN2P32-201ENST00000444648 269 ntBASIC3.68□□□□□ -1.82
NID1P14543 AC023449.1-201ENST00000454464 154 ntBASIC3.68□□□□□ -1.82
NID1P14543 HMGN2P9-201ENST00000476875 229 ntBASIC3.68□□□□□ -1.82
NID1P14543 AP003327.1-201ENST00000529684 127 ntBASIC3.68□□□□□ -1.82
NID1P14543 HIGD1AP1-201ENST00000550979 275 ntBASIC3.68□□□□□ -1.82
NID1P14543 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.68□□□□□ -1.82
NID1P14543 PRELID2P1-201ENST00000552837 301 ntBASIC3.68□□□□□ -1.82
NID1P14543 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.68□□□□□ -1.82
NID1P14543 AC093732.2-201ENST00000607950 274 ntBASIC3.68□□□□□ -1.82
NID1P14543 MIR6868-201ENST00000611215 58 ntBASIC3.68□□□□□ -1.82
NID1P14543 AL591424.2-201ENST00000617023 128 ntBASIC3.68□□□□□ -1.82
NID1P14543 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.68□□□□□ -1.82
NID1P14543 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
NID1P14543 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NID1P14543 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.68□□□□□ -1.82
NID1P14543 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.67□□□□□ -1.82
NID1P14543 Y_RNA.85-201ENST00000363014 111 ntBASIC3.67□□□□□ -1.82
NID1P14543 Y_RNA.163-201ENST00000363702 113 ntBASIC3.67□□□□□ -1.82
NID1P14543 RNA5SP125-201ENST00000364843 120 ntBASIC3.67□□□□□ -1.82
NID1P14543 SNORA51.4-201ENST00000364993 124 ntBASIC3.67□□□□□ -1.82
NID1P14543 MIR1302-5-201ENST00000408164 150 ntBASIC3.67□□□□□ -1.82
NID1P14543 GOT2P5-201ENST00000433995 546 ntBASIC3.67□□□□□ -1.82
NID1P14543 AC083863.1-201ENST00000438811 231 ntBASIC3.67□□□□□ -1.82
NID1P14543 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.67□□□□□ -1.82
NID1P14543 RBMY2UP-201ENST00000453474 324 ntBASIC3.67□□□□□ -1.82
NID1P14543 SNORD77.4-201ENST00000516158 81 ntBASIC3.67□□□□□ -1.82
NID1P14543 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.67□□□□□ -1.82
NID1P14543 AC007012.1-201ENST00000567192 175 ntBASIC3.67□□□□□ -1.82
NID1P14543 MIR4286-201ENST00000580651 93 ntBASIC3.67□□□□□ -1.82
NID1P14543 AC105245.1-201ENST00000581934 244 ntBASIC3.67□□□□□ -1.82
NID1P14543 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NID1P14543 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NID1P14543 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NID1P14543 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.67□□□□□ -1.82
NID1P14543 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
NID1P14543 UBE3AP2-201ENST00000429033 2259 ntBASIC3.67□□□□□ -1.82
NID1P14543 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NID1P14543 RNA5SP189-201ENST00000364920 115 ntBASIC3.66□□□□□ -1.82
NID1P14543 SNORA51.5-201ENST00000384126 131 ntBASIC3.66□□□□□ -1.82
NID1P14543 Y_RNA.528-201ENST00000384575 108 ntBASIC3.66□□□□□ -1.82
NID1P14543 SNORD12C-201ENST00000386307 89 ntBASIC3.66□□□□□ -1.82
NID1P14543 SNORA12-201ENST00000391162 147 ntBASIC3.66□□□□□ -1.82
NID1P14543 AL139095.1-201ENST00000404326 391 ntBASIC3.66□□□□□ -1.82
NID1P14543 MIR1183-201ENST00000408856 89 ntBASIC3.66□□□□□ -1.82
NID1P14543 RNA5SP127-201ENST00000411051 133 ntBASIC3.66□□□□□ -1.82
NID1P14543 EDDM3CP-201ENST00000415977 425 ntBASIC3.66□□□□□ -1.82
NID1P14543 AL353705.1-201ENST00000433468 480 ntBASIC3.66□□□□□ -1.82
NID1P14543 AL021397.1-201ENST00000451806 248 ntBASIC3.66□□□□□ -1.82
NID1P14543 AC026726.1-201ENST00000512859 601 ntBASIC3.66□□□□□ -1.82
NID1P14543 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.66□□□□□ -1.82
NID1P14543 RN7SL703P-201ENST00000578485 302 ntBASIC3.66□□□□□ -1.82
NID1P14543 uc_338.4-201ENST00000616635 176 ntBASIC3.66□□□□□ -1.82
NID1P14543 AC009831.4-201ENST00000620744 325 ntBASIC3.66□□□□□ -1.82
NID1P14543 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.66□□□□□ -1.82
NID1P14543 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.66□□□□□ -1.82
NID1P14543 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NID1P14543 AC010733.2-201ENST00000589496 5702 ntBASIC3.66□□□□□ -1.82
NID1P14543 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NID1P14543 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NID1P14543 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NID1P14543 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NID1P14543 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NID1P14543 AL596211.1-201ENST00000569873 2277 ntBASIC3.65□□□□□ -1.82
NID1P14543 AL353746.1-201ENST00000566293 6881 ntBASIC3.65□□□□□ -1.82
NID1P14543 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NID1P14543 MAPK10-373ENST00000641983 6772 ntBASIC3.65□□□□□ -1.82
NID1P14543 SNORA71.3-201ENST00000362582 128 ntBASIC3.65□□□□□ -1.83
NID1P14543 RNA5SP399-201ENST00000364003 117 ntBASIC3.65□□□□□ -1.83
NID1P14543 RNU4-13P-201ENST00000364019 141 ntBASIC3.65□□□□□ -1.83
NID1P14543 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.83
NID1P14543 RNU6-49P-201ENST00000384256 107 ntBASIC3.65□□□□□ -1.83
NID1P14543 MIR624-201ENST00000385217 97 ntBASIC3.65□□□□□ -1.83
NID1P14543 MIR147B-201ENST00000390185 80 ntBASIC3.65□□□□□ -1.83
NID1P14543 MIR891A-201ENST00000401237 79 ntBASIC3.65□□□□□ -1.83
NID1P14543 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.65□□□□□ -1.83
NID1P14543 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.65□□□□□ -1.83
NID1P14543 AC010598.1-201ENST00000510378 103 ntBASIC3.65□□□□□ -1.83
NID1P14543 AC005921.1-201ENST00000510589 286 ntBASIC3.65□□□□□ -1.83
NID1P14543 SNORA40.13-201ENST00000516379 120 ntBASIC3.65□□□□□ -1.83
NID1P14543 RNU6-638P-201ENST00000516582 104 ntBASIC3.65□□□□□ -1.83
NID1P14543 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.65□□□□□ -1.83
NID1P14543 IGKV1-22-201ENST00000524313 326 ntBASIC3.65□□□□□ -1.83
NID1P14543 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.65□□□□□ -1.83
NID1P14543 MIR4444-1-201ENST00000581696 74 ntBASIC3.65□□□□□ -1.83
NID1P14543 MIR4444-2-201ENST00000584390 74 ntBASIC3.65□□□□□ -1.83
NID1P14543 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NID1P14543 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NID1P14543 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.64□□□□□ -1.83
NID1P14543 USP8P1-201ENST00000494673 3183 ntBASIC3.64□□□□□ -1.83
NID1P14543 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.64□□□□□ -1.83
NID1P14543 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NID1P14543 snoU2_19.1-201ENST00000362361 80 ntBASIC3.64□□□□□ -1.83
NID1P14543 PTMAP2-201ENST00000397627 327 ntBASIC3.64□□□□□ -1.83
NID1P14543 YME1L1P1-201ENST00000429435 297 ntBASIC3.64□□□□□ -1.83
NID1P14543 RNA5SP20-201ENST00000515976 84 ntBASIC3.64□□□□□ -1.83
NID1P14543 RNU6-63P-201ENST00000516690 95 ntBASIC3.64□□□□□ -1.83
NID1P14543 YPEL5P3-201ENST00000547227 352 ntBASIC3.64□□□□□ -1.83
NID1P14543 MIR2681-201ENST00000581814 105 ntBASIC3.64□□□□□ -1.83
NID1P14543 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms