Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 MIR126-201ENST00000362291 85 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 Y_RNA.135-201ENST00000363439 95 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-1305P-201ENST00000364353 104 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-1019P-201ENST00000364424 107 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 Y_RNA.318-201ENST00000365131 97 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 U8.10-201ENST00000384260 133 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-975P-201ENST00000384296 105 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-1235P-201ENST00000384559 107 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 Y_RNA.554-201ENST00000384672 102 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 MIR320A-201ENST00000385302 82 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AL589823.1-201ENST00000429577 183 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC245047.4-201ENST00000433189 144 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 UBE2V1P8-201ENST00000437166 265 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC074290.1-201ENST00000448883 135 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-498P-201ENST00000459468 107 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 HMGN2P9-201ENST00000476875 229 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC027575.1-201ENST00000481064 460 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 ACA59.1-201ENST00000515966 143 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 RNA5SP384-201ENST00000516615 116 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 MIR3683-201ENST00000580847 82 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 MIR3672-201ENST00000584290 82 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC019193.3-201ENST00000609144 554 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 AP000648.3-201ENST00000623539 4507 ntBASIC1.23□□□□□ -2.21
IGHV3-43DP0DP04 RNY4P14-201ENST00000363656 96 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 RNU1-42P-201ENST00000364033 160 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 Y_RNA.212-201ENST00000364177 102 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-338P-201ENST00000383888 105 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 MIR586-201ENST00000385035 97 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AL117342.1-201ENST00000404861 406 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 RN7SKP51-201ENST00000410781 304 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AL354695.1-201ENST00000427935 228 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 HSPE1P9-201ENST00000440046 311 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 RPL36AP21-201ENST00000490372 323 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-720P-201ENST00000516363 108 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-548P-201ENST00000517083 115 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 RNA5SP437-201ENST00000517249 129 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 TPRKBP2-201ENST00000565969 475 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 EIF1P4-201ENST00000572664 335 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC093783.1-201ENST00000612976 329 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC126177.8-201ENST00000618339 1015 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC006504.8-201ENST00000621046 635 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC009033.1-201ENST00000624279 431 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 AC090617.10-201ENST00000624308 134 ntBASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
IGHV3-43DP0DP04 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.3-201ENST00000362331 103 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 RNU4-9P-201ENST00000364951 139 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 RNU4-12P-201ENST00000365233 139 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.450-201ENST00000384198 113 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 MIR32-201ENST00000384965 70 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 MIR517C-201ENST00000385103 95 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 SNORA67.6-201ENST00000391093 99 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 MIR1267-201ENST00000408723 78 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 CST2P1-201ENST00000425770 87 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 C8orf59P1-201ENST00000429930 303 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 MTCO3P29-201ENST00000432119 779 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 snoU13.9-201ENST00000458927 103 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-273P-201ENST00000516937 96 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 RNU1-117P-201ENST00000517041 158 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 MIR4255-201ENST00000579351 72 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AL645939.4-201ENST00000604495 135 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AC124303.1-201ENST00000605703 360 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AL353149.1-201ENST00000610667 244 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AC006001.4-201ENST00000622243 395 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AL078596.1-201ENST00000624856 447 ntBASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.89-201ENST00000363031 102 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 RNU4-42P-201ENST00000364738 142 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 SNORD116-11-201ENST00000383882 92 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 Y_RNA.573-201ENST00000384763 105 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-174P-201ENST00000410406 106 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 RPS20P15-201ENST00000412792 311 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 AC009161.1-201ENST00000417306 376 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 AL121890.1-201ENST00000435457 205 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 Z82188.1-201ENST00000436709 154 ntBASIC1.2□□□□□ -2.22
IGHV3-43DP0DP04 AC069257.2-201ENST00000441819 155 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms