Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC012557.2-201ENST00000605919 418 ntBASIC0.53□□□□□ -2.32
TPM1P09493 snoZ196.1-201ENST00000625269 89 ntBASIC0.53□□□□□ -2.32
TPM1P09493 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TPM1P09493 RNU6-1240P-201ENST00000365155 104 ntBASIC0.52□□□□□ -2.33
TPM1P09493 RNU4-48P-201ENST00000365559 182 ntBASIC0.52□□□□□ -2.33
TPM1P09493 MTCO2P3-201ENST00000442543 421 ntBASIC0.52□□□□□ -2.33
TPM1P09493 RPS29P15-201ENST00000458329 171 ntBASIC0.52□□□□□ -2.33
TPM1P09493 AC113410.1-201ENST00000505029 247 ntBASIC0.52□□□□□ -2.33
TPM1P09493 AC025465.4-201ENST00000513422 638 ntBASIC0.52□□□□□ -2.33
TPM1P09493 AC108729.3-201ENST00000513484 108 ntBASIC0.52□□□□□ -2.33
TPM1P09493 RNU6-323P-201ENST00000521915 107 ntBASIC0.52□□□□□ -2.33
TPM1P09493 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.52□□□□□ -2.33
TPM1P09493 MIR4703-201ENST00000577728 79 ntBASIC0.52□□□□□ -2.33
TPM1P09493 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.52□□□□□ -2.33
TPM1P09493 MTND4P5-201ENST00000435821 1374 ntBASIC0.52□□□□□ -2.33
TPM1P09493 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TPM1P09493 RNU6-1097P-201ENST00000363586 107 ntBASIC0.51□□□□□ -2.33
TPM1P09493 U3.8-201ENST00000363675 217 ntBASIC0.51□□□□□ -2.33
TPM1P09493 RNU6-108P-201ENST00000365558 107 ntBASIC0.51□□□□□ -2.33
TPM1P09493 SNORD116-13-201ENST00000384408 92 ntBASIC0.51□□□□□ -2.33
TPM1P09493 SNORA75.2-201ENST00000391138 150 ntBASIC0.51□□□□□ -2.33
TPM1P09493 SNORA75.3-201ENST00000391231 150 ntBASIC0.51□□□□□ -2.33
TPM1P09493 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.51□□□□□ -2.33
TPM1P09493 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.51□□□□□ -2.33
TPM1P09493 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.51□□□□□ -2.33
TPM1P09493 AC010493.1-201ENST00000513479 292 ntBASIC0.51□□□□□ -2.33
TPM1P09493 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.51□□□□□ -2.33
TPM1P09493 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
TPM1P09493 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.51□□□□□ -2.33
TPM1P09493 CYP3A137P-201ENST00000562436 69 ntBASIC0.51□□□□□ -2.33
TPM1P09493 MIR4498-201ENST00000577599 66 ntBASIC0.51□□□□□ -2.33
TPM1P09493 MIR4781-201ENST00000585250 76 ntBASIC0.51□□□□□ -2.33
TPM1P09493 AC068790.2-201ENST00000602601 557 ntBASIC0.51□□□□□ -2.33
TPM1P09493 MIR6715A-201ENST00000615929 79 ntBASIC0.51□□□□□ -2.33
TPM1P09493 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
TPM1P09493 AC068792.1-201ENST00000621354 417 ntBASIC0.51□□□□□ -2.33
TPM1P09493 RNU5B-2P-201ENST00000363036 113 ntBASIC0.5□□□□□ -2.33
TPM1P09493 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TPM1P09493 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.5□□□□□ -2.33
TPM1P09493 UBE2D3P4-201ENST00000441973 436 ntBASIC0.5□□□□□ -2.33
TPM1P09493 SCARNA18-201ENST00000459004 134 ntBASIC0.5□□□□□ -2.33
TPM1P09493 RNU6-221P-201ENST00000459541 99 ntBASIC0.5□□□□□ -2.33
TPM1P09493 GMFBP1-201ENST00000467831 427 ntBASIC0.5□□□□□ -2.33
TPM1P09493 AL049830.1-201ENST00000468034 425 ntBASIC0.5□□□□□ -2.33
TPM1P09493 SNORA70.12-201ENST00000516084 153 ntBASIC0.5□□□□□ -2.33
TPM1P09493 RNU6-917P-201ENST00000516294 104 ntBASIC0.5□□□□□ -2.33
TPM1P09493 RNA5SP102-201ENST00000516865 106 ntBASIC0.5□□□□□ -2.33
TPM1P09493 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.5□□□□□ -2.33
TPM1P09493 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
TPM1P09493 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.5□□□□□ -2.33
TPM1P09493 AL078596.1-201ENST00000624856 447 ntBASIC0.5□□□□□ -2.33
TPM1P09493 AC008873.1-201ENST00000625051 138 ntBASIC0.5□□□□□ -2.33
TPM1P09493 OR4G1P-203ENST00000641984 1631 ntBASIC0.49□□□□□ -2.33
TPM1P09493 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
TPM1P09493 SNORA2.2-201ENST00000365473 135 ntBASIC0.49□□□□□ -2.33
TPM1P09493 Y_RNA.399-201ENST00000383955 105 ntBASIC0.49□□□□□ -2.33
TPM1P09493 MIR513B-201ENST00000385136 84 ntBASIC0.49□□□□□ -2.33
TPM1P09493 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
TPM1P09493 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.49□□□□□ -2.33
TPM1P09493 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.49□□□□□ -2.33
TPM1P09493 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.49□□□□□ -2.33
TPM1P09493 FABP5P5-201ENST00000515537 406 ntBASIC0.49□□□□□ -2.33
TPM1P09493 RNU7-128P-201ENST00000517247 62 ntBASIC0.49□□□□□ -2.33
TPM1P09493 AC104984.5-201ENST00000586878 94 ntBASIC0.49□□□□□ -2.33
TPM1P09493 SNRPGP20-201ENST00000604477 205 ntBASIC0.49□□□□□ -2.33
TPM1P09493 RNU6-85P-201ENST00000605989 107 ntBASIC0.49□□□□□ -2.33
TPM1P09493 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.49□□□□□ -2.33
TPM1P09493 TUSC7.1-201ENST00000610969 165 ntBASIC0.49□□□□□ -2.33
TPM1P09493 AP000568.1-201ENST00000282964 442 ntBASIC0.48□□□□□ -2.33
TPM1P09493 RNY1P10-201ENST00000363268 113 ntBASIC0.48□□□□□ -2.33
TPM1P09493 SNORA67.2-201ENST00000384300 149 ntBASIC0.48□□□□□ -2.33
TPM1P09493 MIR1-2-201ENST00000384961 85 ntBASIC0.48□□□□□ -2.33
TPM1P09493 RNU6-1106P-201ENST00000390845 107 ntBASIC0.48□□□□□ -2.33
TPM1P09493 RNA5SP494-201ENST00000410653 129 ntBASIC0.48□□□□□ -2.33
TPM1P09493 RNU6-321P-201ENST00000410912 106 ntBASIC0.48□□□□□ -2.33
TPM1P09493 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.48□□□□□ -2.33
TPM1P09493 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.48□□□□□ -2.33
TPM1P09493 AC022364.2-201ENST00000457963 554 ntBASIC0.48□□□□□ -2.33
TPM1P09493 AC007215.1-201ENST00000464893 276 ntBASIC0.48□□□□□ -2.33
TPM1P09493 BNIP3P39-201ENST00000601077 554 ntBASIC0.48□□□□□ -2.33
TPM1P09493 AC025449.1-201ENST00000603896 529 ntBASIC0.48□□□□□ -2.33
TPM1P09493 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.48□□□□□ -2.33
TPM1P09493 ELL2P3-201ENST00000457883 1602 ntBASIC0.47□□□□□ -2.33
TPM1P09493 MIR96-201ENST00000362288 78 ntBASIC0.47□□□□□ -2.33
TPM1P09493 RNU6-227P-201ENST00000362865 103 ntBASIC0.47□□□□□ -2.33
TPM1P09493 RNY4P34-201ENST00000364779 95 ntBASIC0.47□□□□□ -2.33
TPM1P09493 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
TPM1P09493 MIR10B-201ENST00000385011 110 ntBASIC0.47□□□□□ -2.33
TPM1P09493 RNU6-1186P-201ENST00000410429 97 ntBASIC0.47□□□□□ -2.33
TPM1P09493 AL354692.1-201ENST00000423044 315 ntBASIC0.47□□□□□ -2.33
TPM1P09493 ZNF114P1-201ENST00000453500 292 ntBASIC0.47□□□□□ -2.33
TPM1P09493 RNU7-94P-201ENST00000459576 63 ntBASIC0.47□□□□□ -2.33
TPM1P09493 RNU6-612P-201ENST00000516909 102 ntBASIC0.47□□□□□ -2.33
TPM1P09493 AP002001.1-203ENST00000534002 267 ntBASIC0.47□□□□□ -2.33
TPM1P09493 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.47□□□□□ -2.33
TPM1P09493 MIR3682-201ENST00000581338 84 ntBASIC0.47□□□□□ -2.33
TPM1P09493 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.47□□□□□ -2.33
TPM1P09493 AP000240.1-201ENST00000609910 452 ntBASIC0.47□□□□□ -2.33
TPM1P09493 AP002371.2-201ENST00000624450 503 ntBASIC0.47□□□□□ -2.33
TPM1P09493 RNU1-93P-201ENST00000364704 169 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms