Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC112771.1-201ENST00000463581 102 ntBASIC3.38□□□□□ -1.87
SYPP08247 AC005840.1-201ENST00000498412 377 ntBASIC3.38□□□□□ -1.87
SYPP08247 RPL23AP94-201ENST00000512518 302 ntBASIC3.38□□□□□ -1.87
SYPP08247 RNU2-44P-201ENST00000516795 194 ntBASIC3.38□□□□□ -1.87
SYPP08247 AC079598.5-201ENST00000547460 117 ntBASIC3.38□□□□□ -1.87
SYPP08247 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.38□□□□□ -1.87
SYPP08247 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.38□□□□□ -1.87
SYPP08247 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.38□□□□□ -1.87
SYPP08247 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYPP08247 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYPP08247 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SYPP08247 AC069528.2-201ENST00000624849 1991 ntBASIC3.38□□□□□ -1.87
SYPP08247 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYPP08247 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SYPP08247 Y_RNA.182-201ENST00000363880 111 ntBASIC3.37□□□□□ -1.87
SYPP08247 RNU4-84P-201ENST00000364200 139 ntBASIC3.37□□□□□ -1.87
SYPP08247 RNU6-449P-201ENST00000383914 107 ntBASIC3.37□□□□□ -1.87
SYPP08247 RNU6-381P-201ENST00000391259 108 ntBASIC3.37□□□□□ -1.87
SYPP08247 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
SYPP08247 AL365496.1-201ENST00000426885 215 ntBASIC3.37□□□□□ -1.87
SYPP08247 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.37□□□□□ -1.87
SYPP08247 RPS29P31-201ENST00000446147 164 ntBASIC3.37□□□□□ -1.87
SYPP08247 AC146507.2-201ENST00000460608 476 ntBASIC3.37□□□□□ -1.87
SYPP08247 RN7SL594P-201ENST00000470590 287 ntBASIC3.37□□□□□ -1.87
SYPP08247 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.37□□□□□ -1.87
SYPP08247 RNA5SP341-201ENST00000516261 117 ntBASIC3.37□□□□□ -1.87
SYPP08247 SNORA31.21-201ENST00000517180 77 ntBASIC3.37□□□□□ -1.87
SYPP08247 RNU6-1231P-201ENST00000517185 103 ntBASIC3.37□□□□□ -1.87
SYPP08247 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.37□□□□□ -1.87
SYPP08247 U6.98-201ENST00000637157 84 ntBASIC3.37□□□□□ -1.87
SYPP08247 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SYPP08247 AC068700.1-201ENST00000565862 3754 ntBASIC3.37□□□□□ -1.87
SYPP08247 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SYPP08247 AC026241.1-201ENST00000517873 2142 ntBASIC3.37□□□□□ -1.87
SYPP08247 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SYPP08247 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SYPP08247 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SYPP08247 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.36□□□□□ -1.87
SYPP08247 snoU2_19.1-201ENST00000362361 80 ntBASIC3.36□□□□□ -1.87
SYPP08247 RNU6-1081P-201ENST00000384537 107 ntBASIC3.36□□□□□ -1.87
SYPP08247 MIR184-201ENST00000384962 84 ntBASIC3.36□□□□□ -1.87
SYPP08247 AP000567.1-201ENST00000406413 156 ntBASIC3.36□□□□□ -1.87
SYPP08247 NDUFB1P1-201ENST00000435191 180 ntBASIC3.36□□□□□ -1.87
SYPP08247 SEPT7P4-201ENST00000437076 306 ntBASIC3.36□□□□□ -1.87
SYPP08247 AC006445.1-201ENST00000491925 405 ntBASIC3.36□□□□□ -1.87
SYPP08247 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.36□□□□□ -1.87
SYPP08247 EIF4BP1-201ENST00000554881 351 ntBASIC3.36□□□□□ -1.87
SYPP08247 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.36□□□□□ -1.87
SYPP08247 uc_338.14-201ENST00000613162 166 ntBASIC3.36□□□□□ -1.87
SYPP08247 AC013791.1-201ENST00000616619 62 ntBASIC3.36□□□□□ -1.87
SYPP08247 AC006386.2-201ENST00000624491 75 ntBASIC3.36□□□□□ -1.87
SYPP08247 AC012005.1-201ENST00000624575 75 ntBASIC3.36□□□□□ -1.87
SYPP08247 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SYPP08247 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SYPP08247 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.36□□□□□ -1.87
SYPP08247 AC010329.5-201ENST00000623497 2174 ntBASIC3.35□□□□□ -1.87
SYPP08247 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYPP08247 U3.8-201ENST00000363675 217 ntBASIC3.35□□□□□ -1.87
SYPP08247 Y_RNA.361-201ENST00000365515 120 ntBASIC3.35□□□□□ -1.87
SYPP08247 Y_RNA.400-201ENST00000383963 111 ntBASIC3.35□□□□□ -1.87
SYPP08247 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.35□□□□□ -1.87
SYPP08247 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
SYPP08247 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.35□□□□□ -1.87
SYPP08247 AC006111.3-201ENST00000622137 383 ntBASIC3.35□□□□□ -1.87
SYPP08247 AC008873.1-201ENST00000625051 138 ntBASIC3.35□□□□□ -1.87
SYPP08247 AL021368.2-201ENST00000606125 5352 ntBASIC3.35□□□□□ -1.87
SYPP08247 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SYPP08247 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.35□□□□□ -1.87
SYPP08247 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SYPP08247 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYPP08247 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYPP08247 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
SYPP08247 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYPP08247 MIR422A-201ENST00000362286 90 ntBASIC3.34□□□□□ -1.87
SYPP08247 Y_RNA.287-201ENST00000364853 94 ntBASIC3.34□□□□□ -1.87
SYPP08247 RNU6-275P-201ENST00000364910 107 ntBASIC3.34□□□□□ -1.87
SYPP08247 Y_RNA.357-201ENST00000365487 109 ntBASIC3.34□□□□□ -1.87
SYPP08247 SNORA72.4-201ENST00000384174 132 ntBASIC3.34□□□□□ -1.87
SYPP08247 RNU6-131P-201ENST00000391144 107 ntBASIC3.34□□□□□ -1.87
SYPP08247 SNORA12-201ENST00000391162 147 ntBASIC3.34□□□□□ -1.87
SYPP08247 MIR1289-1-201ENST00000408836 144 ntBASIC3.34□□□□□ -1.87
SYPP08247 RNU6-710P-201ENST00000410424 105 ntBASIC3.34□□□□□ -1.87
SYPP08247 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
SYPP08247 Z75741.1-201ENST00000446793 314 ntBASIC3.34□□□□□ -1.87
SYPP08247 RPS20P10-201ENST00000451209 253 ntBASIC3.34□□□□□ -1.87
SYPP08247 AL049830.2-201ENST00000480072 201 ntBASIC3.34□□□□□ -1.87
SYPP08247 RPL36AP48-201ENST00000485521 314 ntBASIC3.34□□□□□ -1.87
SYPP08247 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.34□□□□□ -1.87
SYPP08247 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
SYPP08247 HSPE1P18-201ENST00000517602 280 ntBASIC3.34□□□□□ -1.87
SYPP08247 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.34□□□□□ -1.87
SYPP08247 XIST_intron.1-201ENST00000619444 68 ntBASIC3.34□□□□□ -1.87
SYPP08247 U6.115-201ENST00000636045 103 ntBASIC3.34□□□□□ -1.87
SYPP08247 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.87
SYPP08247 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SYPP08247 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SYPP08247 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SYPP08247 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.34□□□□□ -1.88
SYPP08247 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SYPP08247 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 352.6 ms