Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL356010.1-201ENST00000456364 102 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 RPL31P3-201ENST00000458430 332 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU7-14P-201ENST00000459331 62 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC021146.2-201ENST00000504736 556 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU5F-4P-201ENST00000516581 114 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 Y_RNA.695-201ENST00000516715 107 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU6-1098P-201ENST00000516772 96 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 MRPS36P4-201ENST00000534436 298 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.75□□□□□ -2.29
COL4A1P02462 SUB1P2-201ENST00000556401 297 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC021231.3-201ENST00000558497 370 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 MTCO3P23-201ENST00000561363 289 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AL158211.1-201ENST00000566763 763 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 CYP4A27P-201ENST00000567218 190 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC121247.2-201ENST00000604776 136 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC064836.2-201ENST00000609491 462 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC007684.1-201ENST00000609671 477 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AL158209.2-201ENST00000619266 216 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.75□□□□□ -2.29
COL4A1P02462 MIR6863-201ENST00000636112 90 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC090582.1-201ENST00000636321 199 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU6-552P-201ENST00000362869 119 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU6-1317P-201ENST00000364582 104 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 Y_RNA.390-201ENST00000383932 102 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU5A-6P-201ENST00000384136 116 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 MIR618-201ENST00000385287 98 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNA5SP100-201ENST00000410903 110 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNA5SP59-201ENST00000410922 110 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC009310.1-201ENST00000414414 451 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC123900.1-201ENST00000420390 96 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL4A1P02462 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL4A1P02462 C1DP4-201ENST00000455429 424 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU7-167P-201ENST00000459160 62 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 RNU7-138P-201ENST00000459479 64 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC145146.1-201ENST00000496370 254 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC016632.1-201ENST00000503994 196 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC091885.1-201ENST00000506658 268 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AK3P2-201ENST00000507976 429 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 AC067942.3-201ENST00000512025 362 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.75□□□□□ -2.29
COL4A1P02462 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.75□□□□□ -2.29
COL4A1P02462 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.75□□□□□ -2.29
COL4A1P02462 AC026371.1-201ENST00000551867 419 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AL157687.1-201ENST00000554853 619 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 FGF7P1-201ENST00000582820 288 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 AC004223.2-201ENST00000590309 544 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 MIR8074-201ENST00000615081 81 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.75□□□□□ -2.29
COL4A1P02462 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL4A1P02462 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL4A1P02462 AL159152.1-201ENST00000635019 2587 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC092268.1-201ENST00000342691 405 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 Y_RNA.1-201ENST00000352915 104 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 RNU6-1303P-201ENST00000364841 107 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 Y_RNA.518-201ENST00000384552 113 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 RNU6-1235P-201ENST00000384559 107 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL4A1P02462 RNU2-7P-201ENST00000410794 178 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.74□□□□□ -2.29
COL4A1P02462 AL590135.1-201ENST00000422215 156 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC019205.3-201ENST00000424573 156 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.74□□□□□ -2.29
COL4A1P02462 AC092628.1-201ENST00000436250 252 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC016700.2-201ENST00000446011 156 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AL035666.1-201ENST00000446195 348 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.74□□□□□ -2.29
COL4A1P02462 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.74□□□□□ -2.29
COL4A1P02462 RNU6-498P-201ENST00000459468 107 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC007547.1-201ENST00000462177 490 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 RPS29P27-201ENST00000463711 170 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC015911.1-201ENST00000495111 156 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC010486.3-201ENST00000511602 785 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
COL4A1P02462 RNVU1-2-201ENST00000516326 135 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 RNU6-229P-201ENST00000516614 102 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 SNORA31.17-201ENST00000516953 127 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC104383.1-201ENST00000530297 370 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC090115.3-201ENST00000553218 849 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.74□□□□□ -2.29
COL4A1P02462 AC091135.1-201ENST00000585943 307 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AP001836.1-201ENST00000604675 523 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 AC022079.1-201ENST00000621546 602 ntBASIC0.74□□□□□ -2.29
COL4A1P02462 RNU6-562P-201ENST00000362731 107 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RNU6-259P-201ENST00000383999 107 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 RNU6-418P-201ENST00000384035 107 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 SNORA29-201ENST00000384183 140 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 Y_RNA.553-201ENST00000384670 102 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.73□□□□□ -2.29
COL4A1P02462 AC012306.1-201ENST00000423267 114 ntBASIC0.73□□□□□ -2.29
COL4A1P02462 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms