Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC006483.1-201ENST00000487308 313 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 MLLT10P2-201ENST00000506434 249 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AK3P2-201ENST00000507976 429 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.21□□□□□ -2.06
COL2A1P02458 AL157871.3-201ENST00000557231 293 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.21□□□□□ -2.06
COL2A1P02458 AL161798.1-201ENST00000604630 131 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AC006023.2-201ENST00000609916 167 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AC006065.5-201ENST00000623427 349 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL2A1P02458 MTND5P9-201ENST00000503854 1755 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
COL2A1P02458 AC103988.1-201ENST00000566382 2177 ntBASIC2.21□□□□□ -2.06
COL2A1P02458 AL391987.6-201ENST00000305671 199 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 Y_RNA.123-201ENST00000363338 102 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 RNU6-595P-201ENST00000363944 107 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 RNU6-200P-201ENST00000364743 107 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 RNU6-596P-201ENST00000365395 98 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL2A1P02458 MIR10A-201ENST00000385043 110 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL2A1P02458 MTCO2P33-201ENST00000402100 465 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 RNU6-1203P-201ENST00000410703 110 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL2A1P02458 EIF4EP2-201ENST00000422816 654 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC007560.1-201ENST00000426912 237 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AL445305.1-201ENST00000432577 575 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 Z82188.1-201ENST00000436709 154 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 FCF1P4-201ENST00000448326 183 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 TOMM22P6-201ENST00000465035 409 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.2□□□□□ -2.06
COL2A1P02458 RNU6-1315P-201ENST00000517187 99 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.2□□□□□ -2.06
COL2A1P02458 MRPS36P4-201ENST00000534436 298 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC136932.1-201ENST00000574771 208 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.2□□□□□ -2.06
COL2A1P02458 AC097372.5-201ENST00000623665 376 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.2□□□□□ -2.06
COL2A1P02458 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL2A1P02458 ZNF299P-201ENST00000406845 1804 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL2A1P02458 Y_RNA.117-201ENST00000363294 101 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 Y_RNA.562-201ENST00000384695 113 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 MIR514A1-201ENST00000385133 98 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 MIR1294-201ENST00000408503 142 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 DAP3P1-201ENST00000441522 278 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.2□□□□□ -2.06
COL2A1P02458 AC079804.2-201ENST00000490376 200 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 RPL23AP63-201ENST00000498752 471 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC093852.1-201ENST00000503587 266 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 RNU6-1256P-201ENST00000516539 103 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC109329.1-201ENST00000518744 317 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.2□□□□□ -2.06
COL2A1P02458 AC020895.1-201ENST00000595362 272 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC004792.1-201ENST00000614523 137 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 AC084768.2-201ENST00000622736 221 ntBASIC2.2□□□□□ -2.06
COL2A1P02458 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
COL2A1P02458 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
COL2A1P02458 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL2A1P02458 AC110774.1-201ENST00000623567 2018 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 Y_RNA.183-201ENST00000363882 113 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 Y_RNA.297-201ENST00000364950 91 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 Y_RNA.416-201ENST00000384014 113 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 RNU6-937P-201ENST00000384325 106 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 AL591034.2-201ENST00000402839 359 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 AL513331.1-201ENST00000411908 397 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.19□□□□□ -2.06
COL2A1P02458 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.19□□□□□ -2.06
COL2A1P02458 RNU6-612P-201ENST00000516909 102 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 RNU6-182P-201ENST00000516970 105 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 SNORA81.3-201ENST00000517283 198 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.19□□□□□ -2.06
COL2A1P02458 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.19□□□□□ -2.06
COL2A1P02458 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.19□□□□□ -2.06
COL2A1P02458 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.19□□□□□ -2.06
COL2A1P02458 MIR5696-201ENST00000578474 85 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 MIR4474-201ENST00000579189 78 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 AC008121.1-201ENST00000603244 268 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 U6.104-201ENST00000637979 90 ntBASIC2.19□□□□□ -2.06
COL2A1P02458 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL2A1P02458 RNU6-280P-201ENST00000364145 104 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 Y_RNA.541-201ENST00000384640 113 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL2A1P02458 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
COL2A1P02458 SNORA67.5-201ENST00000391036 107 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 RNU6-837P-201ENST00000391056 108 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 MTCO3P19-201ENST00000415864 321 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.18□□□□□ -2.06
COL2A1P02458 HMGN2P20-201ENST00000437531 273 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.18□□□□□ -2.06
COL2A1P02458 RPL23AP58-201ENST00000440453 469 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AC092798.1-201ENST00000458542 409 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 AC107032.1-201ENST00000485945 480 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 RNU6-927P-201ENST00000516199 100 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
COL2A1P02458 RNU6-250P-201ENST00000516958 103 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms