Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORA26.3-201ENST00000391119 136 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 MIR942-201ENST00000401111 86 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 RNU2-8P-201ENST00000410727 190 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.31□□□□□ -2.36
COL1A1P02452 AC090960.1-201ENST00000421072 306 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC012306.1-201ENST00000423267 114 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.31□□□□□ -2.36
COL1A1P02452 USP9YP28-201ENST00000435142 589 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 EXOSC3P1-201ENST00000448649 500 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.31□□□□□ -2.36
COL1A1P02452 AC116562.3-201ENST00000506136 177 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC079140.5-201ENST00000507882 310 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 HSPE1P23-201ENST00000509838 286 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.31□□□□□ -2.36
COL1A1P02452 SNORD79.1-201ENST00000516069 84 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC068587.5-201ENST00000528506 175 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AL590705.4-201ENST00000532209 134 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC091489.2-201ENST00000566263 604 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC009994.1-201ENST00000606889 253 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC021506.2-201ENST00000612354 169 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AL139418.1-201ENST00000613613 177 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AL607023.1-201ENST00000620045 248 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AC009878.1-201ENST00000621819 340 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 AL359697.1-201ENST00000624879 587 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 U6.114-201ENST00000636407 96 ntBASIC0.31□□□□□ -2.36
COL1A1P02452 SNORD115-7-201ENST00000365306 82 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNU6-533P-201ENST00000384144 107 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 Y_RNA.504-201ENST00000384481 104 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 SNORA80D-201ENST00000384488 135 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNU6-700P-201ENST00000391043 107 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNA5SP323-201ENST00000391094 133 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNU6-1093P-201ENST00000391194 107 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNA5SP467-201ENST00000391274 118 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 MIR208B-201ENST00000401172 77 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 MIR1253-201ENST00000408273 105 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 MIR1283-1-201ENST00000408494 87 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 AC011233.1-201ENST00000422812 283 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 MTCO3P18-201ENST00000440206 761 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 AC245047.7-201ENST00000440265 293 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.3□□□□□ -2.36
COL1A1P02452 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.3□□□□□ -2.36
COL1A1P02452 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.3□□□□□ -2.36
COL1A1P02452 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.3□□□□□ -2.36
COL1A1P02452 SNORA14.1-201ENST00000516113 141 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNU6-947P-201ENST00000516264 106 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNA5SP255-201ENST00000516370 107 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 RNU1-142P-201ENST00000516682 145 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
COL1A1P02452 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.3□□□□□ -2.36
COL1A1P02452 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.3□□□□□ -2.36
COL1A1P02452 PCMTD1P2-201ENST00000565017 355 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 TPRKBP2-201ENST00000565969 475 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 AL929325.1-201ENST00000603096 117 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 Z98751.3-201ENST00000604447 521 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 AL138726.1-201ENST00000614873 333 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 AC019226.2-201ENST00000625973 424 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 AC023934.1-201ENST00000574529 2389 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 MTND5P17-201ENST00000418405 1603 ntBASIC0.3□□□□□ -2.36
COL1A1P02452 snoU2-30.2-201ENST00000362805 70 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNU6-1287P-201ENST00000362914 107 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 SNORD95.1-201ENST00000364099 68 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 Y_RNA.480-201ENST00000384364 102 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNU6-1060P-201ENST00000384664 107 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNU6-1031P-201ENST00000384773 107 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNA5SP266-201ENST00000410273 108 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 Y_RNA.608-201ENST00000410647 95 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC010154.1-201ENST00000425857 269 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AL356583.2-201ENST00000426536 280 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.29□□□□□ -2.36
COL1A1P02452 CETN4P-201ENST00000432407 469 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 SNAP23P1-201ENST00000433229 246 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 MTATP6P16-201ENST00000434543 526 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.29□□□□□ -2.36
COL1A1P02452 AL162395.1-201ENST00000457882 422 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNU6-1178P-201ENST00000516674 107 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 MIR4509-3-201ENST00000578671 94 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.29□□□□□ -2.36
COL1A1P02452 MIR4509-2-201ENST00000583920 94 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 MIR4999-201ENST00000585029 91 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 Z83818.1-201ENST00000603584 150 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.29□□□□□ -2.36
COL1A1P02452 AC108676.2-201ENST00000605225 163 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 MIR4509-1-201ENST00000618224 94 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.29□□□□□ -2.36
COL1A1P02452 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
COL1A1P02452 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
COL1A1P02452 Y_RNA.22-201ENST00000362492 102 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNU6-1200P-201ENST00000384162 107 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNU6-975P-201ENST00000384296 105 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 Y_RNA.571-201ENST00000384753 98 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 SNORA40.4-201ENST00000390971 128 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 RNU6-1242P-201ENST00000391052 103 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.29□□□□□ -2.36
COL1A1P02452 AC084290.1-201ENST00000434995 374 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC079382.1-201ENST00000493346 557 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC105758.1-201ENST00000506038 399 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC007834.2-201ENST00000536310 343 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.29□□□□□ -2.36
COL1A1P02452 MIR4305-201ENST00000583252 102 ntBASIC0.29□□□□□ -2.36
COL1A1P02452 AL031281.1-201ENST00000604049 488 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms