Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.38□□□□□ -2.47
TNFP01375 MTCO2P7-201ENST00000446518 666 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC093899.1-201ENST00000457984 376 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC116562.3-201ENST00000506136 177 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.38□□□□□ -2.47
TNFP01375 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.38□□□□□ -2.47
TNFP01375 AL450270.1-201ENST00000606160 391 ntBASIC-0.38□□□□□ -2.47
TNFP01375 RNU1-29P-201ENST00000606574 126 ntBASIC-0.38□□□□□ -2.47
TNFP01375 uc_338.28-201ENST00000612082 187 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC024940.5-201ENST00000622889 474 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC093875.1-201ENST00000623688 504 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AC098679.4-201ENST00000624241 654 ntBASIC-0.38□□□□□ -2.47
TNFP01375 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.38□□□□□ -2.47
TNFP01375 AP000568.1-201ENST00000282964 442 ntBASIC-0.39□□□□□ -2.47
TNFP01375 SNORD114-11-201ENST00000363738 75 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RNU6-289P-201ENST00000364093 107 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RNU6-777P-201ENST00000364265 104 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RNU6-187P-201ENST00000384139 106 ntBASIC-0.39□□□□□ -2.47
TNFP01375 SNORD111-201ENST00000408139 94 ntBASIC-0.39□□□□□ -2.47
TNFP01375 MIR1912-201ENST00000410389 80 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RNU6-994P-201ENST00000410507 111 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RNU6-735P-201ENST00000410612 107 ntBASIC-0.39□□□□□ -2.47
TNFP01375 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.39□□□□□ -2.47
TNFP01375 MTND4P32-201ENST00000437189 1237 ntBASIC-0.39□□□□□ -2.47
TNFP01375 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.39□□□□□ -2.47
TNFP01375 AC093850.1-201ENST00000454121 251 ntBASIC-0.39□□□□□ -2.47
TNFP01375 AC074133.1-201ENST00000515696 183 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RN7SKP164-201ENST00000516138 266 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RNU2-34P-201ENST00000516534 121 ntBASIC-0.39□□□□□ -2.47
TNFP01375 RNA5SP94-201ENST00000516917 108 ntBASIC-0.39□□□□□ -2.47
TNFP01375 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.39□□□□□ -2.47
TNFP01375 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.39□□□□□ -2.47
TNFP01375 AC007684.1-201ENST00000609671 477 ntBASIC-0.39□□□□□ -2.47
TNFP01375 MIR8076-201ENST00000611401 83 ntBASIC-0.39□□□□□ -2.47
TNFP01375 uc_338.36-201ENST00000622331 158 ntBASIC-0.39□□□□□ -2.47
TNFP01375 MIR1295B-201ENST00000636144 60 ntBASIC-0.39□□□□□ -2.47
TNFP01375 MIR655-201ENST00000362159 97 ntBASIC-0.4□□□□□ -2.47
TNFP01375 AC083799.1-201ENST00000366451 910 ntBASIC-0.4□□□□□ -2.47
TNFP01375 RNU6-378P-201ENST00000384324 107 ntBASIC-0.4□□□□□ -2.47
TNFP01375 SNORA8.2-201ENST00000384372 139 ntBASIC-0.4□□□□□ -2.47
TNFP01375 MIR329-1-201ENST00000385028 80 ntBASIC-0.4□□□□□ -2.47
TNFP01375 RNU6-679P-201ENST00000391003 106 ntBASIC-0.4□□□□□ -2.47
TNFP01375 RNA5SP300-201ENST00000391197 107 ntBASIC-0.4□□□□□ -2.47
TNFP01375 AC245047.3-201ENST00000429428 127 ntBASIC-0.4□□□□□ -2.47
TNFP01375 USP9YP28-201ENST00000435142 589 ntBASIC-0.4□□□□□ -2.47
TNFP01375 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.4□□□□□ -2.47
TNFP01375 AL049829.1-201ENST00000465411 156 ntBASIC-0.4□□□□□ -2.47
TNFP01375 AC026782.1-201ENST00000512952 449 ntBASIC-0.4□□□□□ -2.47
TNFP01375 RNU6-150P-201ENST00000516237 95 ntBASIC-0.4□□□□□ -2.47
TNFP01375 SNORA40.12-201ENST00000516329 111 ntBASIC-0.4□□□□□ -2.47
TNFP01375 RNU6-897P-201ENST00000517135 105 ntBASIC-0.4□□□□□ -2.47
TNFP01375 RNU7-128P-201ENST00000517247 62 ntBASIC-0.4□□□□□ -2.47
TNFP01375 DEFB108A-201ENST00000530110 222 ntBASIC-0.4□□□□□ -2.47
TNFP01375 AC104072.1-201ENST00000568817 668 ntBASIC-0.4□□□□□ -2.47
TNFP01375 MIR4802-201ENST00000581881 80 ntBASIC-0.4□□□□□ -2.47
TNFP01375 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.4□□□□□ -2.47
TNFP01375 AC104458.1-201ENST00000608243 463 ntBASIC-0.4□□□□□ -2.47
TNFP01375 AC240442.1-201ENST00000616055 283 ntBASIC-0.4□□□□□ -2.47
TNFP01375 AC103706.2-201ENST00000638080 240 ntBASIC-0.4□□□□□ -2.47
TNFP01375 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
TNFP01375 SNORA25.3-201ENST00000363205 127 ntBASIC-0.41□□□□□ -2.48
TNFP01375 RNU6-35P-201ENST00000384530 107 ntBASIC-0.41□□□□□ -2.48
TNFP01375 RNU6-925P-201ENST00000384629 104 ntBASIC-0.41□□□□□ -2.48
TNFP01375 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.41□□□□□ -2.48
TNFP01375 MRPL42P3-201ENST00000401492 326 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AL031779.1-201ENST00000415663 330 ntBASIC-0.41□□□□□ -2.48
TNFP01375 ZNF885P-201ENST00000420174 1098 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC133104.1-201ENST00000429100 218 ntBASIC-0.41□□□□□ -2.48
TNFP01375 CALM2P4-201ENST00000430810 426 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC093019.1-201ENST00000443135 252 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC069271.1-201ENST00000445577 156 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.41□□□□□ -2.48
TNFP01375 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.41□□□□□ -2.48
TNFP01375 RPS29P15-201ENST00000458329 171 ntBASIC-0.41□□□□□ -2.48
TNFP01375 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.41□□□□□ -2.48
TNFP01375 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.41□□□□□ -2.48
TNFP01375 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.41□□□□□ -2.48
TNFP01375 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.41□□□□□ -2.48
TNFP01375 RNY4P37-201ENST00000516225 96 ntBASIC-0.41□□□□□ -2.48
TNFP01375 RNA5SP395-201ENST00000516567 118 ntBASIC-0.41□□□□□ -2.48
TNFP01375 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.41□□□□□ -2.48
TNFP01375 AC021451.1-201ENST00000523498 1129 ntBASIC-0.41□□□□□ -2.48
TNFP01375 DEFB131C-201ENST00000528817 165 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC087883.1-201ENST00000551882 391 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.41□□□□□ -2.48
TNFP01375 MIR5589-201ENST00000579442 60 ntBASIC-0.41□□□□□ -2.48
TNFP01375 MIR4300-201ENST00000581016 96 ntBASIC-0.41□□□□□ -2.48
TNFP01375 MIR4636-201ENST00000582271 80 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC004987.4-201ENST00000603383 338 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC025449.1-201ENST00000603896 529 ntBASIC-0.41□□□□□ -2.48
TNFP01375 RBM11P1-201ENST00000604951 799 ntBASIC-0.41□□□□□ -2.48
TNFP01375 Z99289.3-201ENST00000605586 594 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC090186.1-201ENST00000605991 572 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AL591926.4-201ENST00000616895 298 ntBASIC-0.41□□□□□ -2.48
TNFP01375 AC099654.8-201ENST00000637757 681 ntBASIC-0.41□□□□□ -2.48
TNFP01375 RNU5B-1-201ENST00000363286 116 ntBASIC-0.42□□□□□ -2.48
TNFP01375 RNA5SP368-201ENST00000364298 116 ntBASIC-0.42□□□□□ -2.48
TNFP01375 RNU4-56P-201ENST00000364700 142 ntBASIC-0.42□□□□□ -2.48
TNFP01375 SNORD14C-201ENST00000365382 88 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms