Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AL050343.2-201ENST00000607338 280 ntBASIC1.43□□□□□ -2.18
MBD3O95983 OR4G1P-203ENST00000641984 1631 ntBASIC1.43□□□□□ -2.18
MBD3O95983 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
MBD3O95983 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
MBD3O95983 SNORD113-7-201ENST00000363762 77 ntBASIC1.42□□□□□ -2.18
MBD3O95983 SNORA72.2-201ENST00000365028 127 ntBASIC1.42□□□□□ -2.18
MBD3O95983 RNU6-418P-201ENST00000384035 107 ntBASIC1.42□□□□□ -2.18
MBD3O95983 RNU6-933P-201ENST00000384424 107 ntBASIC1.42□□□□□ -2.18
MBD3O95983 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
MBD3O95983 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.42□□□□□ -2.18
MBD3O95983 MTND3P21-201ENST00000433774 331 ntBASIC1.42□□□□□ -2.18
MBD3O95983 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.42□□□□□ -2.18
MBD3O95983 MTND1P1-201ENST00000445453 368 ntBASIC1.42□□□□□ -2.18
MBD3O95983 HMGN2P9-201ENST00000476875 229 ntBASIC1.42□□□□□ -2.18
MBD3O95983 AC004223.1-201ENST00000479840 271 ntBASIC1.42□□□□□ -2.18
MBD3O95983 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.42□□□□□ -2.18
MBD3O95983 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.42□□□□□ -2.18
MBD3O95983 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.42□□□□□ -2.18
MBD3O95983 RNA5SP445-201ENST00000515889 115 ntBASIC1.42□□□□□ -2.18
MBD3O95983 RNU6-344P-201ENST00000516635 111 ntBASIC1.42□□□□□ -2.18
MBD3O95983 RNA5SP54-201ENST00000516951 92 ntBASIC1.42□□□□□ -2.18
MBD3O95983 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.42□□□□□ -2.18
MBD3O95983 MRPS36P4-201ENST00000534436 298 ntBASIC1.42□□□□□ -2.18
MBD3O95983 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.42□□□□□ -2.18
MBD3O95983 RRN3P3-201ENST00000549207 578 ntBASIC1.42□□□□□ -2.18
MBD3O95983 AC024909.2-201ENST00000553035 286 ntBASIC1.42□□□□□ -2.18
MBD3O95983 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.42□□□□□ -2.18
MBD3O95983 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.42□□□□□ -2.18
MBD3O95983 MIR338-201ENST00000636369 67 ntBASIC1.42□□□□□ -2.18
MBD3O95983 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
MBD3O95983 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
MBD3O95983 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
MBD3O95983 SNORD115-8-201ENST00000363856 82 ntBASIC1.41□□□□□ -2.18
MBD3O95983 SNORD115-38-201ENST00000365037 82 ntBASIC1.41□□□□□ -2.18
MBD3O95983 MIR1285-1-201ENST00000408593 84 ntBASIC1.41□□□□□ -2.18
MBD3O95983 RNU6-908P-201ENST00000410160 94 ntBASIC1.41□□□□□ -2.18
MBD3O95983 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
MBD3O95983 Z83846.1-201ENST00000446798 265 ntBASIC1.41□□□□□ -2.18
MBD3O95983 RPL23AP75-201ENST00000491601 451 ntBASIC1.41□□□□□ -2.18
MBD3O95983 AF186996.7-201ENST00000492781 209 ntBASIC1.41□□□□□ -2.18
MBD3O95983 RNU6-1041P-201ENST00000516254 102 ntBASIC1.41□□□□□ -2.18
MBD3O95983 RNU6-1146P-201ENST00000516282 102 ntBASIC1.41□□□□□ -2.18
MBD3O95983 RNU6-1332P-201ENST00000516666 104 ntBASIC1.41□□□□□ -2.18
MBD3O95983 RNU6-902P-201ENST00000517212 91 ntBASIC1.41□□□□□ -2.18
MBD3O95983 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.41□□□□□ -2.18
MBD3O95983 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.41□□□□□ -2.18
MBD3O95983 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.41□□□□□ -2.18
MBD3O95983 MIR4769-201ENST00000584126 77 ntBASIC1.41□□□□□ -2.18
MBD3O95983 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.41□□□□□ -2.18
MBD3O95983 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.41□□□□□ -2.18
MBD3O95983 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
MBD3O95983 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
MBD3O95983 RNU6-137P-201ENST00000363680 108 ntBASIC1.4□□□□□ -2.19
MBD3O95983 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
MBD3O95983 RNU2-7P-201ENST00000410794 178 ntBASIC1.4□□□□□ -2.19
MBD3O95983 RNU6-1068P-201ENST00000410958 103 ntBASIC1.4□□□□□ -2.19
MBD3O95983 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.4□□□□□ -2.19
MBD3O95983 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.4□□□□□ -2.19
MBD3O95983 AL591806.2-201ENST00000433122 173 ntBASIC1.4□□□□□ -2.19
MBD3O95983 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.4□□□□□ -2.19
MBD3O95983 MTCO3P8-201ENST00000453691 755 ntBASIC1.4□□□□□ -2.19
MBD3O95983 RNU6-1198P-201ENST00000516904 67 ntBASIC1.4□□□□□ -2.19
MBD3O95983 RNA5SP437-201ENST00000517249 129 ntBASIC1.4□□□□□ -2.19
MBD3O95983 MTND1P35-201ENST00000526739 508 ntBASIC1.4□□□□□ -2.19
MBD3O95983 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.4□□□□□ -2.19
MBD3O95983 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
MBD3O95983 AC008873.1-201ENST00000625051 138 ntBASIC1.4□□□□□ -2.19
MBD3O95983 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.4□□□□□ -2.19
MBD3O95983 RNU6-271P-201ENST00000363858 105 ntBASIC1.39□□□□□ -2.19
MBD3O95983 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
MBD3O95983 RNU6-245P-201ENST00000384020 107 ntBASIC1.39□□□□□ -2.19
MBD3O95983 SNORD116-2-201ENST00000384274 95 ntBASIC1.39□□□□□ -2.19
MBD3O95983 SNORA67.2-201ENST00000384300 149 ntBASIC1.39□□□□□ -2.19
MBD3O95983 SNORD116-6-201ENST00000384711 96 ntBASIC1.39□□□□□ -2.19
MBD3O95983 MIR521-1-201ENST00000384902 87 ntBASIC1.39□□□□□ -2.19
MBD3O95983 SNORA67.5-201ENST00000391036 107 ntBASIC1.39□□□□□ -2.19
MBD3O95983 ZNF885P-201ENST00000420174 1098 ntBASIC1.39□□□□□ -2.19
MBD3O95983 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
MBD3O95983 RPS26P55-201ENST00000471178 356 ntBASIC1.39□□□□□ -2.19
MBD3O95983 RNU6-1281P-201ENST00000516223 105 ntBASIC1.39□□□□□ -2.19
MBD3O95983 AC024995.1-201ENST00000523014 93 ntBASIC1.39□□□□□ -2.19
MBD3O95983 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
MBD3O95983 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.39□□□□□ -2.19
MBD3O95983 PRR13P7-201ENST00000605538 430 ntBASIC1.39□□□□□ -2.19
MBD3O95983 MIR3976-201ENST00000606807 139 ntBASIC1.39□□□□□ -2.19
MBD3O95983 RMST_3.1-201ENST00000611651 109 ntBASIC1.39□□□□□ -2.19
MBD3O95983 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.39□□□□□ -2.19
MBD3O95983 AC126177.8-201ENST00000618339 1015 ntBASIC1.39□□□□□ -2.19
MBD3O95983 SCARNA4-201ENST00000629045 128 ntBASIC1.39□□□□□ -2.19
MBD3O95983 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
MBD3O95983 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
MBD3O95983 snoU2-30.2-201ENST00000362805 70 ntBASIC1.38□□□□□ -2.19
MBD3O95983 SNORD115-32-201ENST00000364079 82 ntBASIC1.38□□□□□ -2.19
MBD3O95983 U8.10-201ENST00000384260 133 ntBASIC1.38□□□□□ -2.19
MBD3O95983 Y_RNA.530-201ENST00000384587 101 ntBASIC1.38□□□□□ -2.19
MBD3O95983 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
MBD3O95983 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
MBD3O95983 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.38□□□□□ -2.19
MBD3O95983 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.38□□□□□ -2.19
MBD3O95983 snoU13.30-201ENST00000458951 104 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms