Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNU1-52P-201ENST00000384190 164 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 RNU6-1011P-201ENST00000384668 107 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 MIR218-1-201ENST00000384999 110 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 MIR153-2-201ENST00000385225 87 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 RNU6-700P-201ENST00000391043 107 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 SNORA46.1-201ENST00000391069 153 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 RNU1-139P-201ENST00000391307 165 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 MIR190B-201ENST00000401119 79 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 AC005534.2-201ENST00000431047 433 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN1O95832 AC011753.1-201ENST00000451001 220 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.02□□□□□ -2.09
CLDN1O95832 RNU7-175P-201ENST00000515915 61 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 IGLV3-17-201ENST00000519099 244 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN1O95832 AC138305.3-201ENST00000624988 240 ntBASIC2.02□□□□□ -2.09
CLDN1O95832 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN1O95832 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN1O95832 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN1O95832 Y_RNA.31-201ENST00000362574 102 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 RNU4-42P-201ENST00000364738 142 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 RNU6-1274P-201ENST00000384557 107 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 RNU6-1156P-201ENST00000410365 100 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 MCFD2P1-201ENST00000417812 300 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 AC007098.1-201ENST00000420122 367 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN1O95832 AC140059.1-201ENST00000489238 361 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 AC145146.1-201ENST00000496370 254 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 AC105758.1-201ENST00000506038 399 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 RNU7-4P-201ENST00000516961 62 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN1O95832 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN1O95832 EIF4A1P12-201ENST00000551910 141 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 PRELID2P1-201ENST00000552837 301 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN1O95832 MIR3171-201ENST00000584270 74 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 7SK.7-201ENST00000603504 247 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 AL355802.3-201ENST00000607571 545 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN1O95832 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 MIR219B-201ENST00000637023 88 ntBASIC2.01□□□□□ -2.09
CLDN1O95832 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.01□□□□□ -2.09
CLDN1O95832 snoU2_19.1-201ENST00000362361 80 ntBASIC2□□□□□ -2.09
CLDN1O95832 Y_RNA.28-201ENST00000362554 111 ntBASIC2□□□□□ -2.09
CLDN1O95832 RNU1-51P-201ENST00000365345 176 ntBASIC2□□□□□ -2.09
CLDN1O95832 Y_RNA.364-201ENST00000365532 101 ntBASIC2□□□□□ -2.09
CLDN1O95832 Y_RNA.428-201ENST00000384078 102 ntBASIC2□□□□□ -2.09
CLDN1O95832 RNU6-378P-201ENST00000384324 107 ntBASIC2□□□□□ -2.09
CLDN1O95832 RNY1P14-201ENST00000384426 108 ntBASIC2□□□□□ -2.09
CLDN1O95832 MIR489-201ENST00000384923 84 ntBASIC2□□□□□ -2.09
CLDN1O95832 MIR32-201ENST00000384965 70 ntBASIC2□□□□□ -2.09
CLDN1O95832 CEP57L1P1-201ENST00000430943 1201 ntBASIC2□□□□□ -2.09
CLDN1O95832 AL139109.1-201ENST00000455491 297 ntBASIC2□□□□□ -2.09
CLDN1O95832 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2□□□□□ -2.09
CLDN1O95832 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2□□□□□ -2.09
CLDN1O95832 RNU6-911P-201ENST00000516523 104 ntBASIC2□□□□□ -2.09
CLDN1O95832 Y_RNA.706-201ENST00000516933 99 ntBASIC2□□□□□ -2.09
CLDN1O95832 SNORA48.11-201ENST00000517015 89 ntBASIC2□□□□□ -2.09
CLDN1O95832 SNORD116.3-201ENST00000517176 78 ntBASIC2□□□□□ -2.09
CLDN1O95832 AC121758.2-201ENST00000553271 193 ntBASIC2□□□□□ -2.09
CLDN1O95832 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2□□□□□ -2.09
CLDN1O95832 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2□□□□□ -2.09
CLDN1O95832 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2□□□□□ -2.09
CLDN1O95832 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2□□□□□ -2.09
CLDN1O95832 MIR6845-201ENST00000613182 61 ntBASIC2□□□□□ -2.09
CLDN1O95832 MIR4272-201ENST00000635924 64 ntBASIC2□□□□□ -2.09
CLDN1O95832 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLDN1O95832 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2□□□□□ -2.09
CLDN1O95832 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLDN1O95832 BX322639.1-202ENST00000423987 2213 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.99□□□□□ -2.09
CLDN1O95832 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN1O95832 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CLDN1O95832 Y_RNA.132-201ENST00000363421 102 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 Y_RNA.148-201ENST00000363557 117 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 Y_RNA.319-201ENST00000365138 92 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 Y_RNA.326-201ENST00000365176 113 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR487A-201ENST00000385009 80 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR625-201ENST00000385047 85 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR524-201ENST00000385242 87 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR208B-201ENST00000401172 77 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN1O95832 MTND4P19-201ENST00000446659 478 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 CHEK2P4-201ENST00000450340 246 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 TOMM22P6-201ENST00000465035 409 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 AC090515.1-201ENST00000465295 476 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 RNU6-475P-201ENST00000516073 104 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 RNU4-77P-201ENST00000516692 156 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 RN7SKP295-201ENST00000517264 153 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 AL442663.2-201ENST00000554385 511 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR5007-201ENST00000583098 95 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 AL670379.2-201ENST00000604983 252 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 snoU13.31-201ENST00000607291 104 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR1244-1-201ENST00000612829 85 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR5739-201ENST00000619803 80 ntBASIC1.99□□□□□ -2.09
CLDN1O95832 MIR1244-3-201ENST00000635744 85 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms