Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.15□□□□□ -1.91
CNOT4O95628 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.15□□□□□ -1.91
CNOT4O95628 MIR4765-201ENST00000585007 77 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.15□□□□□ -1.91
CNOT4O95628 DEFB117-201ENST00000602356 141 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 RNVU1-4-201ENST00000612985 164 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 MTND1P7-201ENST00000632801 297 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CNOT4O95628 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.15□□□□□ -1.91
CNOT4O95628 RNU1-62P-201ENST00000362599 164 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 MIR490-201ENST00000384865 128 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 RNU6-1248P-201ENST00000391096 64 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT4O95628 BTF3P11-201ENST00000426582 477 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 NDUFB1P1-201ENST00000435191 180 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 RPL21P10-201ENST00000463521 490 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AC140059.1-201ENST00000489238 361 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AIG1P1-201ENST00000503376 148 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.14□□□□□ -1.91
CNOT4O95628 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.14□□□□□ -1.91
CNOT4O95628 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.14□□□□□ -1.91
CNOT4O95628 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT4O95628 MIR4298-201ENST00000584380 73 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AL008718.3-201ENST00000610217 321 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 AC005520.5-201ENST00000613926 164 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 SCARNA15.3-201ENST00000626315 122 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 SCARNA4.1-201ENST00000628597 123 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 MIR3674-201ENST00000636576 68 ntBASIC3.14□□□□□ -1.91
CNOT4O95628 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT4O95628 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT4O95628 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CNOT4O95628 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CNOT4O95628 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT4O95628 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.14□□□□□ -1.91
CNOT4O95628 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CNOT4O95628 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.14□□□□□ -1.91
CNOT4O95628 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.13□□□□□ -1.91
CNOT4O95628 RNU6-727P-201ENST00000363592 107 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 Y_RNA.272-201ENST00000364696 102 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 SNORD116-18-201ENST00000383961 92 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 SNORA18.3-201ENST00000384122 132 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 Y_RNA.580-201ENST00000391004 95 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 CYCSP48-201ENST00000417124 323 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 AC009963.1-201ENST00000417265 157 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 AP002001.1-203ENST00000534002 267 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 SNRPGP20-201ENST00000604477 205 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 AC131280.1-202ENST00000624067 4211 ntBASIC3.13□□□□□ -1.91
CNOT4O95628 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT4O95628 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT4O95628 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
CNOT4O95628 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT4O95628 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.12□□□□□ -1.91
CNOT4O95628 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT4O95628 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.12□□□□□ -1.91
CNOT4O95628 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.12□□□□□ -1.91
CNOT4O95628 Y_RNA.7-201ENST00000362352 102 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 SNORA48.2-201ENST00000390926 124 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 RNA5SP475-201ENST00000410568 110 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 Z98742.2-201ENST00000431564 187 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 RN7SL807P-201ENST00000470923 297 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.12□□□□□ -1.91
CNOT4O95628 AC105137.2-201ENST00000569073 466 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 MIR3923-201ENST00000579521 83 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 MIR3117-201ENST00000584034 78 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.12□□□□□ -1.91
CNOT4O95628 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CNOT4O95628 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT4O95628 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNOT4O95628 RNA5SP42-201ENST00000364278 115 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 RNU6-1130P-201ENST00000365434 107 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 RNU4-17P-201ENST00000365598 141 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 RNU6-1117P-201ENST00000384525 104 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 CBX3P9-201ENST00000402326 552 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT4O95628 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT4O95628 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT4O95628 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.11□□□□□ -1.91
CNOT4O95628 RNU5F-2P-201ENST00000516066 82 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 SUMO2P18-201ENST00000518873 252 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT4O95628 MIR3616-201ENST00000584070 92 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 AC006380.1-201ENST00000603598 186 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT4O95628 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT4O95628 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT4O95628 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT4O95628 AC010329.5-201ENST00000623497 2174 ntBASIC3.11□□□□□ -1.91
CNOT4O95628 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CNOT4O95628 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
CNOT4O95628 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CNOT4O95628 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CNOT4O95628 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms