Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC009487.4-201ENST00000624969 3585 ntBASIC2.23□□□□□ -2.05
RTN3O95197 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.23□□□□□ -2.05
RTN3O95197 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
RTN3O95197 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RTN3O95197 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
RTN3O95197 Y_RNA.2-201ENST00000362330 96 ntBASIC2.22□□□□□ -2.05
RTN3O95197 RNU6-545P-201ENST00000362681 104 ntBASIC2.22□□□□□ -2.05
RTN3O95197 SNORD114-6-201ENST00000364393 72 ntBASIC2.22□□□□□ -2.05
RTN3O95197 Y_RNA.238-201ENST00000364441 102 ntBASIC2.22□□□□□ -2.05
RTN3O95197 Y_RNA.390-201ENST00000383932 102 ntBASIC2.22□□□□□ -2.05
RTN3O95197 RNU6-541P-201ENST00000384709 110 ntBASIC2.22□□□□□ -2.05
RTN3O95197 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RTN3O95197 USMG5P1-201ENST00000425964 177 ntBASIC2.22□□□□□ -2.05
RTN3O95197 AC116353.2-201ENST00000505332 712 ntBASIC2.22□□□□□ -2.05
RTN3O95197 Y_RNA.670-201ENST00000516255 105 ntBASIC2.22□□□□□ -2.05
RTN3O95197 RNU6-548P-201ENST00000517083 115 ntBASIC2.22□□□□□ -2.05
RTN3O95197 RNU6-58P-201ENST00000517143 103 ntBASIC2.22□□□□□ -2.05
RTN3O95197 CBX3P8-201ENST00000532412 525 ntBASIC2.22□□□□□ -2.05
RTN3O95197 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.22□□□□□ -2.05
RTN3O95197 AC104581.2-201ENST00000572227 430 ntBASIC2.22□□□□□ -2.05
RTN3O95197 MIR3169-201ENST00000578032 83 ntBASIC2.22□□□□□ -2.05
RTN3O95197 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.22□□□□□ -2.05
RTN3O95197 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.22□□□□□ -2.05
RTN3O95197 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
RTN3O95197 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTN3O95197 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RTN3O95197 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RTN3O95197 Y_RNA.473-201ENST00000384333 102 ntBASIC2.21□□□□□ -2.06
RTN3O95197 SNORA67.3-201ENST00000384366 140 ntBASIC2.21□□□□□ -2.06
RTN3O95197 AC004866.1-201ENST00000411748 78 ntBASIC2.21□□□□□ -2.06
RTN3O95197 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RTN3O95197 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RTN3O95197 HMGN1P12-201ENST00000499125 195 ntBASIC2.21□□□□□ -2.06
RTN3O95197 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.21□□□□□ -2.06
RTN3O95197 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.21□□□□□ -2.06
RTN3O95197 AC027288.2-201ENST00000553028 243 ntBASIC2.21□□□□□ -2.06
RTN3O95197 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.21□□□□□ -2.06
RTN3O95197 AC009229.3-201ENST00000608056 282 ntBASIC2.21□□□□□ -2.06
RTN3O95197 PISRT1.1-201ENST00000616930 107 ntBASIC2.21□□□□□ -2.06
RTN3O95197 U1.36-201ENST00000620684 176 ntBASIC2.21□□□□□ -2.06
RTN3O95197 SDR42E1P4-201ENST00000620894 481 ntBASIC2.21□□□□□ -2.06
RTN3O95197 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.21□□□□□ -2.06
RTN3O95197 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
RTN3O95197 MTND4P12-201ENST00000498999 1377 ntBASIC2.21□□□□□ -2.06
RTN3O95197 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTN3O95197 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
RTN3O95197 MIR340-201ENST00000362125 95 ntBASIC2.2□□□□□ -2.06
RTN3O95197 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
RTN3O95197 SNORD114-1-201ENST00000362705 72 ntBASIC2.2□□□□□ -2.06
RTN3O95197 RNU5F-3P-201ENST00000363767 117 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AL079342.1-201ENST00000401460 267 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AL023284.1-201ENST00000403956 276 ntBASIC2.2□□□□□ -2.06
RTN3O95197 RNA5SP247-201ENST00000411181 105 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AL158823.1-201ENST00000418441 478 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AL353689.1-201ENST00000438895 199 ntBASIC2.2□□□□□ -2.06
RTN3O95197 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.2□□□□□ -2.06
RTN3O95197 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.2□□□□□ -2.06
RTN3O95197 MTCO1P44-201ENST00000441935 243 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AL357134.1-201ENST00000445848 426 ntBASIC2.2□□□□□ -2.06
RTN3O95197 RPL23AP3-201ENST00000453844 468 ntBASIC2.2□□□□□ -2.06
RTN3O95197 Y_RNA.635-201ENST00000459041 101 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AC010531.2-201ENST00000465012 153 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AC114982.1-201ENST00000469402 321 ntBASIC2.2□□□□□ -2.06
RTN3O95197 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.2□□□□□ -2.06
RTN3O95197 RNU6-344P-201ENST00000516635 111 ntBASIC2.2□□□□□ -2.06
RTN3O95197 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.2□□□□□ -2.06
RTN3O95197 AC134698.4-201ENST00000523451 826 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.2□□□□□ -2.06
RTN3O95197 RRN3P3-201ENST00000549207 578 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.2□□□□□ -2.06
RTN3O95197 MIR4801-201ENST00000582704 82 ntBASIC2.2□□□□□ -2.06
RTN3O95197 AL355073.2-201ENST00000612106 557 ntBASIC2.2□□□□□ -2.06
RTN3O95197 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
RTN3O95197 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RTN3O95197 Y_RNA.48-201ENST00000362710 103 ntBASIC2.19□□□□□ -2.06
RTN3O95197 Y_RNA.405-201ENST00000383979 100 ntBASIC2.19□□□□□ -2.06
RTN3O95197 Y_RNA.451-201ENST00000384200 100 ntBASIC2.19□□□□□ -2.06
RTN3O95197 Y_RNA.524-201ENST00000384564 100 ntBASIC2.19□□□□□ -2.06
RTN3O95197 Y_RNA.561-201ENST00000384694 100 ntBASIC2.19□□□□□ -2.06
RTN3O95197 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
RTN3O95197 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.19□□□□□ -2.06
RTN3O95197 RNU2-34P-201ENST00000516534 121 ntBASIC2.19□□□□□ -2.06
RTN3O95197 Y_RNA.706-201ENST00000516933 99 ntBASIC2.19□□□□□ -2.06
RTN3O95197 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.19□□□□□ -2.06
RTN3O95197 AC005786.1-201ENST00000588553 154 ntBASIC2.19□□□□□ -2.06
RTN3O95197 AC243960.4-201ENST00000600532 288 ntBASIC2.19□□□□□ -2.06
RTN3O95197 AC012493.3-201ENST00000604494 112 ntBASIC2.19□□□□□ -2.06
RTN3O95197 AC100812.1-201ENST00000607622 580 ntBASIC2.19□□□□□ -2.06
RTN3O95197 AL162373.1-201ENST00000620433 407 ntBASIC2.19□□□□□ -2.06
RTN3O95197 AC091932.3-201ENST00000624223 323 ntBASIC2.19□□□□□ -2.06
RTN3O95197 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
RTN3O95197 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RTN3O95197 RNU6-280P-201ENST00000364145 104 ntBASIC2.18□□□□□ -2.06
RTN3O95197 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.18□□□□□ -2.06
RTN3O95197 MIR586-201ENST00000385035 97 ntBASIC2.18□□□□□ -2.06
RTN3O95197 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.18□□□□□ -2.06
RTN3O95197 AL356432.1-201ENST00000405809 419 ntBASIC2.18□□□□□ -2.06
RTN3O95197 AL445646.1-201ENST00000431784 216 ntBASIC2.18□□□□□ -2.06
RTN3O95197 MTCO3P29-201ENST00000432119 779 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms