Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SUMO1P2-201ENST00000452524 304 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 SERF1AP1-201ENST00000514575 187 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.99□□□□□ -1.93
CDKL5O76039 RNU6-567P-201ENST00000516746 107 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 EIF4BP1-201ENST00000554881 351 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 MIR4446-201ENST00000578505 67 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AC091152.3-201ENST00000604227 325 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AL049779.4-201ENST00000604500 156 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AC127459.3-201ENST00000624328 466 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.99□□□□□ -1.93
CDKL5O76039 AL365361.1-201ENST00000566942 3481 ntBASIC2.99□□□□□ -1.93
CDKL5O76039 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.99□□□□□ -1.93
CDKL5O76039 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDKL5O76039 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CDKL5O76039 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDKL5O76039 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CDKL5O76039 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.98□□□□□ -1.93
CDKL5O76039 RNU6-137P-201ENST00000363680 108 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 RNU6-873P-201ENST00000363833 107 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 RNU6-1145P-201ENST00000384246 107 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 RNU6-198P-201ENST00000384258 104 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 MIR549A-201ENST00000385268 96 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CDKL5O76039 RNA5SP38-201ENST00000410750 119 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AC138623.1-201ENST00000418060 216 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AC012306.1-201ENST00000423267 114 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.98□□□□□ -1.93
CDKL5O76039 AC073901.1-201ENST00000462471 408 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 RNU4-71P-201ENST00000516258 113 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 RPPH1-2P-201ENST00000516688 293 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.98□□□□□ -1.93
CDKL5O76039 MIR4423-201ENST00000580922 80 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AL138963.2-201ENST00000605137 226 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 BX284668.6-201ENST00000606899 438 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AL365434.2-201ENST00000607979 234 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AC098479.1-201ENST00000609225 154 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AL357075.2-201ENST00000614906 189 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 AC004944.1-201ENST00000517807 3059 ntBASIC2.98□□□□□ -1.93
CDKL5O76039 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDKL5O76039 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDKL5O76039 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDKL5O76039 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDKL5O76039 RNU6-1159P-201ENST00000362933 107 ntBASIC2.97□□□□□ -1.93
CDKL5O76039 RNU6-280P-201ENST00000364145 104 ntBASIC2.97□□□□□ -1.93
CDKL5O76039 Y_RNA.785-201ENST00000384290 109 ntBASIC2.97□□□□□ -1.93
CDKL5O76039 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.97□□□□□ -1.93
CDKL5O76039 PTGES3P4-201ENST00000426243 356 ntBASIC2.97□□□□□ -1.93
CDKL5O76039 SUMO1P4-201ENST00000429430 302 ntBASIC2.97□□□□□ -1.93
CDKL5O76039 SNORA40.9-201ENST00000515895 93 ntBASIC2.97□□□□□ -1.93
CDKL5O76039 AL033523.1-201ENST00000605153 153 ntBASIC2.97□□□□□ -1.93
CDKL5O76039 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.97□□□□□ -1.93
CDKL5O76039 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CDKL5O76039 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDKL5O76039 AC099654.7-201ENST00000635788 2127 ntBASIC2.96□□□□□ -1.93
CDKL5O76039 AC002543.1-201ENST00000299783 1954 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDKL5O76039 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDKL5O76039 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDKL5O76039 SNORA80A-201ENST00000363922 136 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 RNU6-20P-201ENST00000384106 107 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 U3.26-201ENST00000391236 204 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AL139156.1-201ENST00000412785 841 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 RPS26P42-201ENST00000413485 326 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 PIGPP3-201ENST00000425307 415 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.96□□□□□ -1.94
CDKL5O76039 RPS12P2-201ENST00000439728 269 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AC010095.1-201ENST00000443543 144 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AP001486.1-201ENST00000463339 476 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AC107626.1-201ENST00000471084 183 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.96□□□□□ -1.94
CDKL5O76039 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 SNORA81.3-201ENST00000517283 198 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AK6P2-201ENST00000549020 471 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AL137843.1-201ENST00000605078 385 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 SNORD113-5-201ENST00000607261 78 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 SNORD98-201ENST00000636377 67 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AC026241.1-201ENST00000517873 2142 ntBASIC2.96□□□□□ -1.94
CDKL5O76039 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.95□□□□□ -1.94
CDKL5O76039 RNU6-626P-201ENST00000363354 107 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 RNA5SP139-201ENST00000364340 117 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 Y_RNA.297-201ENST00000364950 91 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 RNU6-19P-201ENST00000384718 107 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 Y_RNA.570-201ENST00000384750 101 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 RNA5SP252-201ENST00000391131 119 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.95□□□□□ -1.94
CDKL5O76039 AL513477.1-202ENST00000417061 214 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.95□□□□□ -1.94
CDKL5O76039 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL5O76039 MTND2P29-201ENST00000438595 412 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.95□□□□□ -1.94
CDKL5O76039 PRELID3BP1-201ENST00000457142 540 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.95□□□□□ -1.94
CDKL5O76039 RNU7-23P-201ENST00000459465 62 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 SEPT14P8-201ENST00000508026 178 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 RNU7-110P-201ENST00000516891 62 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 RNU6-1198P-201ENST00000516904 67 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 SNORD19.2-201ENST00000516978 73 ntBASIC2.95□□□□□ -1.94
CDKL5O76039 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms