Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MIR1273D-201ENST00000577266 86 ntBASIC2.84□□□□□ -1.95
CTNND1O60716 MIR3171-201ENST00000584270 74 ntBASIC2.84□□□□□ -1.95
CTNND1O60716 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.84□□□□□ -1.95
CTNND1O60716 AL132822.1-201ENST00000617063 513 ntBASIC2.84□□□□□ -1.95
CTNND1O60716 AC138305.3-201ENST00000624988 240 ntBASIC2.84□□□□□ -1.95
CTNND1O60716 Y_RNA.39-201ENST00000362620 98 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RNU1-76P-201ENST00000362903 159 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RNU6-873P-201ENST00000363833 107 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 SNORA25.6-201ENST00000364121 118 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RNU6-308P-201ENST00000390957 107 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RNU2-48P-201ENST00000410694 191 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.83□□□□□ -1.96
CTNND1O60716 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.83□□□□□ -1.96
CTNND1O60716 AC096638.1-201ENST00000444678 216 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 U8.22-201ENST00000459141 133 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 AL163540.1-201ENST00000485382 386 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.83□□□□□ -1.96
CTNND1O60716 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.83□□□□□ -1.96
CTNND1O60716 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.83□□□□□ -1.96
CTNND1O60716 RNA5SP281-201ENST00000516504 135 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RNU5F-4P-201ENST00000516581 114 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RNU6-1098P-201ENST00000516772 96 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RN7SKP295-201ENST00000517264 153 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 RNU6-988P-201ENST00000519081 107 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 DEFB131C-201ENST00000528817 165 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.83□□□□□ -1.96
CTNND1O60716 MIR5695-201ENST00000579717 85 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 MIR5006-201ENST00000583027 110 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.83□□□□□ -1.96
CTNND1O60716 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.83□□□□□ -1.96
CTNND1O60716 MIR1248-201ENST00000629190 106 ntBASIC2.83□□□□□ -1.96
CTNND1O60716 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CTNND1O60716 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CTNND1O60716 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CTNND1O60716 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
CTNND1O60716 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CTNND1O60716 RNU6-611P-201ENST00000384276 104 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 MCFD2P1-201ENST00000417812 300 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 AC096644.2-201ENST00000429278 159 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 AL445305.1-201ENST00000432577 575 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 MTND4P19-201ENST00000446659 478 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 AC026436.1-201ENST00000510537 270 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 RNU6-911P-201ENST00000516523 104 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 RNU4-77P-201ENST00000516692 156 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 Y_RNA.711-201ENST00000516993 102 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 AC022868.1-201ENST00000517767 391 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CTNND1O60716 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.82□□□□□ -1.96
CTNND1O60716 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.82□□□□□ -1.96
CTNND1O60716 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.82□□□□□ -1.96
CTNND1O60716 AC083806.3-201ENST00000614016 455 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 U2.1-201ENST00000618978 145 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 AL606534.2-204ENST00000635008 178 ntBASIC2.82□□□□□ -1.96
CTNND1O60716 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CTNND1O60716 RNU1-62P-201ENST00000362599 164 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 DEFA7P-201ENST00000382676 285 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 AC009237.7-201ENST00000447357 229 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 CHEK2P4-201ENST00000450340 246 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.81□□□□□ -1.96
CTNND1O60716 SNORA25.10-201ENST00000515926 124 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 RNU6-667P-201ENST00000517186 102 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 MIR4658-201ENST00000584344 65 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 VN1R91P-201ENST00000594377 169 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 AL356055.1-201ENST00000602528 446 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 AC007485.1-201ENST00000616755 206 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 AL138825.1-201ENST00000618587 192 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 MIR4272-201ENST00000635924 64 ntBASIC2.81□□□□□ -1.96
CTNND1O60716 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTNND1O60716 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CTNND1O60716 Y_RNA.202-201ENST00000364083 110 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 RNU6-879P-201ENST00000364328 108 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 RPS12P2-201ENST00000439728 269 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 RNU7-14P-201ENST00000459331 62 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 RNU6-344P-201ENST00000516635 111 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 CYCSP26-201ENST00000534107 320 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 AC093023.1-201ENST00000547375 507 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 AL442663.2-201ENST00000554385 511 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.8□□□□□ -1.96
CTNND1O60716 ANP32BP3-201ENST00000559213 706 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 AC010999.1-201ENST00000611856 324 ntBASIC2.8□□□□□ -1.96
CTNND1O60716 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTNND1O60716 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CTNND1O60716 Y_RNA.179-201ENST00000363844 90 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 SNORA22B-201ENST00000383876 138 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 MTCO3P19-201ENST00000415864 321 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 SUMO1P4-201ENST00000429430 302 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.79□□□□□ -1.96
CTNND1O60716 HMGN2P18-201ENST00000450680 270 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.79□□□□□ -1.96
CTNND1O60716 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CTNND1O60716 AC034114.1-201ENST00000520293 285 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 GNAI2P1-201ENST00000541815 315 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 NDUFA5P6-201ENST00000542110 379 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 AC006600.1-201ENST00000572529 153 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 MIR4524B-201ENST00000581569 115 ntBASIC2.79□□□□□ -1.96
CTNND1O60716 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.79□□□□□ -1.96
CTNND1O60716 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms