Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMX1BO60663 AC138915.1-201ENST00000565427 1685 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 RNU6-1010P-201ENST00000362757 107 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 SNORD56.5-201ENST00000364281 72 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 Y_RNA.350-201ENST00000365409 98 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 Y_RNA.439-201ENST00000384119 94 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 MIR549A-201ENST00000385268 96 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 SNORD78.2-201ENST00000391076 69 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 RNU6-1093P-201ENST00000391194 107 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 MRPL35P1-201ENST00000404272 572 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 RNU2-25P-201ENST00000411041 191 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 RNU6-1001P-201ENST00000411265 100 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AC009414.1-201ENST00000427200 443 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AC010095.1-201ENST00000443543 144 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AC007215.1-201ENST00000464893 276 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 RPL23AP70-201ENST00000483361 460 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 HMGB1P35-201ENST00000503360 598 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AIG1P1-201ENST00000503376 148 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 SNORA31.6-201ENST00000516241 130 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 RNA5SP24-201ENST00000516478 95 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AC091144.1-201ENST00000519573 138 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AC004486.1-201ENST00000546846 233 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 MIR3128-201ENST00000581957 66 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AC005357.1-201ENST00000588399 301 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AC005520.5-201ENST00000613926 164 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 AL357075.2-201ENST00000614906 189 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.25□□□□□ -2.05
LMX1BO60663 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LMX1BO60663 LINC02555-201ENST00000563933 1951 ntBASIC2.25□□□□□ -2.05
LMX1BO60663 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.25□□□□□ -2.05
LMX1BO60663 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.25□□□□□ -2.05
LMX1BO60663 U8.2-201ENST00000363156 134 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 RNU6-879P-201ENST00000364328 108 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 RNA5SP139-201ENST00000364340 117 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 RNU6-937P-201ENST00000384325 106 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 RNU6-102P-201ENST00000384485 104 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 SNORD12B-201ENST00000410433 91 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1BO60663 AP001324.2-201ENST00000461163 319 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 TRBVB-201ENST00000477100 408 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 SRIP1-201ENST00000489235 288 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.24□□□□□ -2.05
LMX1BO60663 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 RNA5SP282-201ENST00000516355 108 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 RN7SKP49-201ENST00000516675 260 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 MIR4423-201ENST00000580922 80 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.24□□□□□ -2.05
LMX1BO60663 AC005296.1-201ENST00000616145 209 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 AC078938.1-201ENST00000620993 318 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 SNORD98-201ENST00000636377 67 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LMX1BO60663 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.24□□□□□ -2.05
LMX1BO60663 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMX1BO60663 AC099654.7-201ENST00000635788 2127 ntBASIC2.24□□□□□ -2.05
LMX1BO60663 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
LMX1BO60663 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LMX1BO60663 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LMX1BO60663 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1BO60663 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LMX1BO60663 Y_RNA.16-201ENST00000362421 102 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 RNU4-15P-201ENST00000362613 141 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 Y_RNA.60-201ENST00000362831 98 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 RNU6-961P-201ENST00000363893 105 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 RNU1-109P-201ENST00000383960 147 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 RNU6-926P-201ENST00000384075 107 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 SNORD63-201ENST00000384262 68 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 Y_RNA.541-201ENST00000384640 113 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 RNA5SP201-201ENST00000410316 124 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.23□□□□□ -2.05
LMX1BO60663 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1BO60663 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1BO60663 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.23□□□□□ -2.05
LMX1BO60663 RPS3P1-201ENST00000456781 192 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.23□□□□□ -2.05
LMX1BO60663 AC107626.1-201ENST00000471084 183 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 GZMAP1-201ENST00000503054 631 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 AC107222.1-201ENST00000510899 637 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 RNU6-826P-201ENST00000516827 104 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 AC115990.1-201ENST00000526957 301 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 AC093023.1-201ENST00000547375 507 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 MIR5695-201ENST00000579717 85 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 MIR3668-201ENST00000582138 75 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 AC010900.2-201ENST00000604508 210 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1BO60663 MIR376A1-201ENST00000616574 68 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 AC137590.2-201ENST00000619709 240 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 SDR42E1P4-201ENST00000620894 481 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 AC002064.3-201ENST00000623448 346 ntBASIC2.23□□□□□ -2.05
LMX1BO60663 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LMX1BO60663 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LMX1BO60663 RNU6-212P-201ENST00000362642 104 ntBASIC2.22□□□□□ -2.05
LMX1BO60663 RNU6-873P-201ENST00000363833 107 ntBASIC2.22□□□□□ -2.05
LMX1BO60663 Y_RNA.237-201ENST00000364439 102 ntBASIC2.22□□□□□ -2.05
LMX1BO60663 RNU6-378P-201ENST00000384324 107 ntBASIC2.22□□□□□ -2.05
LMX1BO60663 Y_RNA.581-201ENST00000391017 97 ntBASIC2.22□□□□□ -2.05
LMX1BO60663 HMGN2P35-201ENST00000412164 270 ntBASIC2.22□□□□□ -2.05
LMX1BO60663 AC005002.2-201ENST00000438228 269 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms