Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AL096861.1-201ENST00000610899 123 ntBASIC0.33□□□□□ -2.36
SSNA1O43805 AC008873.1-201ENST00000625051 138 ntBASIC0.33□□□□□ -2.36
SSNA1O43805 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SSNA1O43805 RNU6-1237P-201ENST00000384777 107 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 RNA5SP494-201ENST00000410653 129 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 HMGN1P14-201ENST00000412459 517 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 AC098592.1-201ENST00000419352 333 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 AL354692.1-201ENST00000423044 315 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 AC108667.1-201ENST00000428618 249 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 CALM2P4-201ENST00000430810 426 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.32□□□□□ -2.36
SSNA1O43805 SCARNA18-201ENST00000459004 134 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 AC069113.1-201ENST00000517763 267 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 SUB1P2-201ENST00000556401 297 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 AL391903.3-201ENST00000612158 163 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 MTND4P9-201ENST00000507819 1346 ntBASIC0.32□□□□□ -2.36
SSNA1O43805 MIR373-201ENST00000362273 69 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 SNORD113-6-201ENST00000363345 75 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 RNU6-17P-201ENST00000384245 107 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 RNU6-18P-201ENST00000384527 107 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 SNORD89-201ENST00000390981 114 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.31□□□□□ -2.36
SSNA1O43805 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 MTCO2P3-201ENST00000442543 421 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 ZNF114P1-201ENST00000453500 292 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 AC093850.1-201ENST00000454121 251 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 TPT1P7-201ENST00000458300 517 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 AC022493.2-201ENST00000506122 481 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.31□□□□□ -2.36
SSNA1O43805 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.31□□□□□ -2.36
SSNA1O43805 AC119751.5-201ENST00000514077 770 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 RNU6-612P-201ENST00000516909 102 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 RNA5SP454-201ENST00000517231 127 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.31□□□□□ -2.36
SSNA1O43805 BNIP3P22-201ENST00000593399 556 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.31□□□□□ -2.36
SSNA1O43805 AC004832.4-201ENST00000608952 331 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 7SK.10-201ENST00000621414 298 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 AC139792.3-201ENST00000623525 224 ntBASIC0.31□□□□□ -2.36
SSNA1O43805 RNY4P34-201ENST00000364779 95 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 RNU6-424P-201ENST00000384367 105 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 SNORD73A-201ENST00000386062 65 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 RNU6-195P-201ENST00000411352 109 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.3□□□□□ -2.36
SSNA1O43805 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.3□□□□□ -2.36
SSNA1O43805 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.3□□□□□ -2.36
SSNA1O43805 AC022364.2-201ENST00000457963 554 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 RPS29P27-201ENST00000463711 170 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.3□□□□□ -2.36
SSNA1O43805 RNU1-117P-201ENST00000517041 158 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 AC011604.1-201ENST00000545978 196 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 AC025627.3-201ENST00000582078 182 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 BNIP3P39-201ENST00000601077 554 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 Z83818.1-201ENST00000603584 150 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 AP000240.1-201ENST00000609910 452 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 MIR7844-201ENST00000616161 122 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 U6.73-201ENST00000619194 103 ntBASIC0.3□□□□□ -2.36
SSNA1O43805 MIR378A-201ENST00000362177 66 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 RNU6-227P-201ENST00000362865 103 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 Y_RNA.327-201ENST00000365201 102 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 U8.16-201ENST00000391279 133 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AL031577.2-201ENST00000404133 280 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 Y_RNA.598-201ENST00000410480 95 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.29□□□□□ -2.36
SSNA1O43805 Z82205.1-201ENST00000428456 297 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AC104332.1-201ENST00000440471 797 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 DAP3P1-201ENST00000441522 278 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 UBE2D3P4-201ENST00000441973 436 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.29□□□□□ -2.36
SSNA1O43805 LINC01399-202ENST00000458450 244 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 U7.7-201ENST00000459276 60 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AC007215.1-201ENST00000464893 276 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 RNU7-99P-201ENST00000516271 62 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 SNORD111.1-201ENST00000516421 86 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.29□□□□□ -2.36
SSNA1O43805 AP003072.2-201ENST00000527756 676 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AL137100.2-201ENST00000555786 315 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AC109446.2-201ENST00000567872 497 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AC023827.1-201ENST00000569247 97 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 AC234772.3-201ENST00000602277 528 ntBASIC0.29□□□□□ -2.36
SSNA1O43805 Y_RNA.330-201ENST00000365230 109 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 MIR513B-201ENST00000385136 84 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 RNA5SP504-201ENST00000410676 117 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 AC106883.1-201ENST00000418805 562 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 MTCO2P34-201ENST00000421994 607 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 AC244505.5-201ENST00000443639 207 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 MTCO2P7-201ENST00000446518 666 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 UBE2V1P12-201ENST00000503954 474 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 MTND2P32-201ENST00000521584 1038 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.28□□□□□ -2.36
SSNA1O43805 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.28□□□□□ -2.36
SSNA1O43805 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.28□□□□□ -2.36
SSNA1O43805 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.28□□□□□ -2.36
SSNA1O43805 AC131055.1-201ENST00000584626 316 ntBASIC0.28□□□□□ -2.36
SSNA1O43805 AC025449.1-201ENST00000603896 529 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms