Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 uc_338.22-201ENST00000622722 187 ntBASIC1.87□□□□□ -2.11
PHF1O43189 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PHF1O43189 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PHF1O43189 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PHF1O43189 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.86□□□□□ -2.11
PHF1O43189 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.86□□□□□ -2.11
PHF1O43189 Y_RNA.48-201ENST00000362710 103 ntBASIC1.86□□□□□ -2.11
PHF1O43189 Y_RNA.138-201ENST00000363462 102 ntBASIC1.86□□□□□ -2.11
PHF1O43189 U3.13-201ENST00000364804 214 ntBASIC1.86□□□□□ -2.11
PHF1O43189 RNA5SP37-201ENST00000365420 130 ntBASIC1.86□□□□□ -2.11
PHF1O43189 Y_RNA.496-201ENST00000384444 101 ntBASIC1.86□□□□□ -2.11
PHF1O43189 SNORA12.2-201ENST00000391040 156 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AL356379.1-201ENST00000414105 126 ntBASIC1.86□□□□□ -2.11
PHF1O43189 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
PHF1O43189 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PHF1O43189 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.86□□□□□ -2.11
PHF1O43189 AC007677.1-201ENST00000445757 515 ntBASIC1.86□□□□□ -2.11
PHF1O43189 OR2AQ1P-201ENST00000451972 200 ntBASIC1.86□□□□□ -2.11
PHF1O43189 snoU13.30-201ENST00000458951 104 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AC087477.1-201ENST00000465747 340 ntBASIC1.86□□□□□ -2.11
PHF1O43189 RPS27P21-201ENST00000486977 252 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AC068781.1-201ENST00000488231 618 ntBASIC1.86□□□□□ -2.11
PHF1O43189 RPL36AP21-201ENST00000490372 323 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.86□□□□□ -2.11
PHF1O43189 RNU6-120P-201ENST00000516077 103 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.86□□□□□ -2.11
PHF1O43189 AC018630.3-201ENST00000542637 96 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AC007375.1-201ENST00000554513 578 ntBASIC1.86□□□□□ -2.11
PHF1O43189 CYP4A27P-201ENST00000567218 190 ntBASIC1.86□□□□□ -2.11
PHF1O43189 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PHF1O43189 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.86□□□□□ -2.11
PHF1O43189 RPL30P11-203ENST00000598995 310 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AL356055.1-201ENST00000602528 446 ntBASIC1.86□□□□□ -2.11
PHF1O43189 SNRPGP17-201ENST00000603780 214 ntBASIC1.86□□□□□ -2.11
PHF1O43189 AC137590.2-201ENST00000619709 240 ntBASIC1.86□□□□□ -2.11
PHF1O43189 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PHF1O43189 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PHF1O43189 RNU6-874P-201ENST00000362390 105 ntBASIC1.85□□□□□ -2.11
PHF1O43189 RNU6-137P-201ENST00000363680 108 ntBASIC1.85□□□□□ -2.11
PHF1O43189 SNORD32B-201ENST00000364460 84 ntBASIC1.85□□□□□ -2.11
PHF1O43189 RNU1-115P-201ENST00000365329 160 ntBASIC1.85□□□□□ -2.11
PHF1O43189 RNU6-1227P-201ENST00000383981 107 ntBASIC1.85□□□□□ -2.11
PHF1O43189 RNU6-474P-201ENST00000384243 107 ntBASIC1.85□□□□□ -2.11
PHF1O43189 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
PHF1O43189 RNA5SP494-201ENST00000410653 129 ntBASIC1.85□□□□□ -2.11
PHF1O43189 MTCYBP10-201ENST00000424905 650 ntBASIC1.85□□□□□ -2.11
PHF1O43189 MTCO3P29-201ENST00000432119 779 ntBASIC1.85□□□□□ -2.11
PHF1O43189 AL353997.1-201ENST00000432936 108 ntBASIC1.85□□□□□ -2.11
PHF1O43189 AC007215.1-201ENST00000464893 276 ntBASIC1.85□□□□□ -2.11
PHF1O43189 SNRPGP7-201ENST00000469016 106 ntBASIC1.85□□□□□ -2.11
PHF1O43189 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.85□□□□□ -2.11
PHF1O43189 AC090255.1-201ENST00000495779 349 ntBASIC1.85□□□□□ -2.11
PHF1O43189 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.85□□□□□ -2.11
PHF1O43189 CYCSP26-201ENST00000534107 320 ntBASIC1.85□□□□□ -2.11
PHF1O43189 PCGEM1.1-201ENST00000613431 131 ntBASIC1.85□□□□□ -2.11
PHF1O43189 AC090971.5-201ENST00000621102 293 ntBASIC1.85□□□□□ -2.11
PHF1O43189 AC134503.1-201ENST00000633048 54 ntBASIC1.85□□□□□ -2.11
PHF1O43189 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PHF1O43189 Y_RNA.128-201ENST00000363391 112 ntBASIC1.84□□□□□ -2.11
PHF1O43189 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
PHF1O43189 RNU1-148P-201ENST00000384472 162 ntBASIC1.84□□□□□ -2.11
PHF1O43189 MIR29B2-201ENST00000385055 81 ntBASIC1.84□□□□□ -2.11
PHF1O43189 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
PHF1O43189 SNORA11.4-201ENST00000408823 129 ntBASIC1.84□□□□□ -2.11
PHF1O43189 PMCHL1-202ENST00000423102 261 ntBASIC1.84□□□□□ -2.11
PHF1O43189 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PHF1O43189 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.84□□□□□ -2.11
PHF1O43189 MIR2053-201ENST00000459295 91 ntBASIC1.84□□□□□ -2.11
PHF1O43189 AC079804.2-201ENST00000490376 200 ntBASIC1.84□□□□□ -2.11
PHF1O43189 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.84□□□□□ -2.11
PHF1O43189 RNU6-699P-201ENST00000517081 110 ntBASIC1.84□□□□□ -2.11
PHF1O43189 AC027288.2-201ENST00000553028 243 ntBASIC1.84□□□□□ -2.11
PHF1O43189 AC020661.2-201ENST00000560114 134 ntBASIC1.84□□□□□ -2.11
PHF1O43189 AC004584.2-201ENST00000570407 410 ntBASIC1.84□□□□□ -2.11
PHF1O43189 MIR3923-201ENST00000579521 83 ntBASIC1.84□□□□□ -2.11
PHF1O43189 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.84□□□□□ -2.11
PHF1O43189 AC138305.3-201ENST00000624988 240 ntBASIC1.84□□□□□ -2.11
PHF1O43189 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
PHF1O43189 MTND4P1-201ENST00000457501 1466 ntBASIC1.83□□□□□ -2.12
PHF1O43189 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PHF1O43189 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PHF1O43189 MIR369-201ENST00000362155 70 ntBASIC1.83□□□□□ -2.12
PHF1O43189 RNU4-56P-201ENST00000364700 142 ntBASIC1.83□□□□□ -2.12
PHF1O43189 Y_RNA.405-201ENST00000383979 100 ntBASIC1.83□□□□□ -2.12
PHF1O43189 Y_RNA.451-201ENST00000384200 100 ntBASIC1.83□□□□□ -2.12
PHF1O43189 RNU6-1274P-201ENST00000384557 107 ntBASIC1.83□□□□□ -2.12
PHF1O43189 Y_RNA.524-201ENST00000384564 100 ntBASIC1.83□□□□□ -2.12
PHF1O43189 Y_RNA.561-201ENST00000384694 100 ntBASIC1.83□□□□□ -2.12
PHF1O43189 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
PHF1O43189 SNORA46.1-201ENST00000391069 153 ntBASIC1.83□□□□□ -2.12
PHF1O43189 MRPS18CP6-201ENST00000423587 223 ntBASIC1.83□□□□□ -2.12
PHF1O43189 MTCO2P12-201ENST00000427426 682 ntBASIC1.83□□□□□ -2.12
PHF1O43189 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.83□□□□□ -2.12
PHF1O43189 AC099799.1-201ENST00000439809 192 ntBASIC1.83□□□□□ -2.12
PHF1O43189 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.83□□□□□ -2.12
PHF1O43189 snoU13.6-201ENST00000458785 104 ntBASIC1.83□□□□□ -2.12
PHF1O43189 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
PHF1O43189 Y_RNA.631-201ENST00000459607 101 ntBASIC1.83□□□□□ -2.12
PHF1O43189 RNU7-175P-201ENST00000515915 61 ntBASIC1.83□□□□□ -2.12
PHF1O43189 Y_RNA.711-201ENST00000516993 102 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms