Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR424-201ENST00000362227 98 ntBASIC1.46□□□□□ -2.18
MSH4O15457 RNU6-623P-201ENST00000363143 105 ntBASIC1.46□□□□□ -2.18
MSH4O15457 RNU6-112P-201ENST00000363599 104 ntBASIC1.46□□□□□ -2.18
MSH4O15457 Y_RNA.327-201ENST00000365201 102 ntBASIC1.46□□□□□ -2.18
MSH4O15457 RNU6-877P-201ENST00000383868 107 ntBASIC1.46□□□□□ -2.18
MSH4O15457 Y_RNA.554-201ENST00000384672 102 ntBASIC1.46□□□□□ -2.18
MSH4O15457 SNORD116-4-201ENST00000384733 96 ntBASIC1.46□□□□□ -2.18
MSH4O15457 MIR758-201ENST00000390227 88 ntBASIC1.46□□□□□ -2.18
MSH4O15457 AL590002.1-201ENST00000406554 418 ntBASIC1.46□□□□□ -2.18
MSH4O15457 RNA5SP247-201ENST00000411181 105 ntBASIC1.46□□□□□ -2.18
MSH4O15457 RPS26P42-201ENST00000413485 326 ntBASIC1.46□□□□□ -2.18
MSH4O15457 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.46□□□□□ -2.18
MSH4O15457 ATP5J2P3-201ENST00000451550 258 ntBASIC1.46□□□□□ -2.18
MSH4O15457 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
MSH4O15457 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
MSH4O15457 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.46□□□□□ -2.18
MSH4O15457 AC016957.1-201ENST00000534895 309 ntBASIC1.46□□□□□ -2.18
MSH4O15457 AC026371.1-201ENST00000551867 419 ntBASIC1.46□□□□□ -2.18
MSH4O15457 AC026470.2-201ENST00000561492 181 ntBASIC1.46□□□□□ -2.18
MSH4O15457 HMGB1P33-201ENST00000563485 527 ntBASIC1.46□□□□□ -2.18
MSH4O15457 CPDP1-201ENST00000579660 283 ntBASIC1.46□□□□□ -2.18
MSH4O15457 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
MSH4O15457 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.46□□□□□ -2.18
MSH4O15457 MIR8076-201ENST00000611401 83 ntBASIC1.46□□□□□ -2.18
MSH4O15457 DISC2.1-201ENST00000612827 205 ntBASIC1.46□□□□□ -2.18
MSH4O15457 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.46□□□□□ -2.18
MSH4O15457 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
MSH4O15457 Y_RNA.38-201ENST00000362617 102 ntBASIC1.45□□□□□ -2.18
MSH4O15457 RNY1P10-201ENST00000363268 113 ntBASIC1.45□□□□□ -2.18
MSH4O15457 Y_RNA.373-201ENST00000365600 103 ntBASIC1.45□□□□□ -2.18
MSH4O15457 RNU6-418P-201ENST00000384035 107 ntBASIC1.45□□□□□ -2.18
MSH4O15457 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
MSH4O15457 MIR300-201ENST00000401138 83 ntBASIC1.45□□□□□ -2.18
MSH4O15457 SNRPEP10-201ENST00000420249 274 ntBASIC1.45□□□□□ -2.18
MSH4O15457 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.45□□□□□ -2.18
MSH4O15457 AC004386.2-201ENST00000441858 148 ntBASIC1.45□□□□□ -2.18
MSH4O15457 AL357134.1-201ENST00000445848 426 ntBASIC1.45□□□□□ -2.18
MSH4O15457 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.45□□□□□ -2.18
MSH4O15457 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.45□□□□□ -2.18
MSH4O15457 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.45□□□□□ -2.18
MSH4O15457 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.45□□□□□ -2.18
MSH4O15457 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.45□□□□□ -2.18
MSH4O15457 MIR5006-201ENST00000583027 110 ntBASIC1.45□□□□□ -2.18
MSH4O15457 MIR4753-201ENST00000585119 83 ntBASIC1.45□□□□□ -2.18
MSH4O15457 AC016925.2-201ENST00000605108 242 ntBASIC1.45□□□□□ -2.18
MSH4O15457 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.45□□□□□ -2.18
MSH4O15457 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
MSH4O15457 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
MSH4O15457 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.45□□□□□ -2.18
MSH4O15457 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
MSH4O15457 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.45□□□□□ -2.18
MSH4O15457 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.44□□□□□ -2.18
MSH4O15457 MIR337-201ENST00000362281 93 ntBASIC1.44□□□□□ -2.18
MSH4O15457 RNU6-862P-201ENST00000362804 105 ntBASIC1.44□□□□□ -2.18
MSH4O15457 RNU6-254P-201ENST00000363377 107 ntBASIC1.44□□□□□ -2.18
MSH4O15457 RNU6-296P-201ENST00000384608 107 ntBASIC1.44□□□□□ -2.18
MSH4O15457 MIR549A-201ENST00000385268 96 ntBASIC1.44□□□□□ -2.18
MSH4O15457 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
MSH4O15457 MIR1283-1-201ENST00000408494 87 ntBASIC1.44□□□□□ -2.18
MSH4O15457 RNU6-908P-201ENST00000410160 94 ntBASIC1.44□□□□□ -2.18
MSH4O15457 MTCO1P21-201ENST00000416634 589 ntBASIC1.44□□□□□ -2.18
MSH4O15457 MTCO1P20-201ENST00000425366 358 ntBASIC1.44□□□□□ -2.18
MSH4O15457 AC099677.2-201ENST00000436385 175 ntBASIC1.44□□□□□ -2.18
MSH4O15457 AC087477.1-201ENST00000465747 340 ntBASIC1.44□□□□□ -2.18
MSH4O15457 AF186996.7-201ENST00000492781 209 ntBASIC1.44□□□□□ -2.18
MSH4O15457 Y_RNA.665-201ENST00000516177 98 ntBASIC1.44□□□□□ -2.18
MSH4O15457 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.44□□□□□ -2.18
MSH4O15457 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.44□□□□□ -2.18
MSH4O15457 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.44□□□□□ -2.18
MSH4O15457 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.44□□□□□ -2.18
MSH4O15457 AP000907.4-201ENST00000604143 237 ntBASIC1.44□□□□□ -2.18
MSH4O15457 AC069114.2-201ENST00000604699 304 ntBASIC1.44□□□□□ -2.18
MSH4O15457 CTHRC1P1-201ENST00000605383 469 ntBASIC1.44□□□□□ -2.18
MSH4O15457 MIR3976-201ENST00000606807 139 ntBASIC1.44□□□□□ -2.18
MSH4O15457 MIR8074-201ENST00000615081 81 ntBASIC1.44□□□□□ -2.18
MSH4O15457 TCL6_2.1-201ENST00000615162 119 ntBASIC1.44□□□□□ -2.18
MSH4O15457 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MSH4O15457 SNORD113-7-201ENST00000363762 77 ntBASIC1.43□□□□□ -2.18
MSH4O15457 RNU6-128P-201ENST00000383976 107 ntBASIC1.43□□□□□ -2.18
MSH4O15457 RNU6-784P-201ENST00000384330 106 ntBASIC1.43□□□□□ -2.18
MSH4O15457 Y_RNA.516-201ENST00000384541 124 ntBASIC1.43□□□□□ -2.18
MSH4O15457 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
MSH4O15457 Y_RNA.615-201ENST00000410769 117 ntBASIC1.43□□□□□ -2.18
MSH4O15457 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.43□□□□□ -2.18
MSH4O15457 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.43□□□□□ -2.18
MSH4O15457 NDUFA5P4-201ENST00000436704 385 ntBASIC1.43□□□□□ -2.18
MSH4O15457 OR2AQ1P-201ENST00000451972 200 ntBASIC1.43□□□□□ -2.18
MSH4O15457 AC005908.1-201ENST00000468701 347 ntBASIC1.43□□□□□ -2.18
MSH4O15457 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.43□□□□□ -2.18
MSH4O15457 FAM206BP-201ENST00000510179 541 ntBASIC1.43□□□□□ -2.18
MSH4O15457 AC025465.3-201ENST00000510570 311 ntBASIC1.43□□□□□ -2.18
MSH4O15457 Y_RNA.655-201ENST00000515919 96 ntBASIC1.43□□□□□ -2.18
MSH4O15457 RNU6-1041P-201ENST00000516254 102 ntBASIC1.43□□□□□ -2.18
MSH4O15457 RNU6-720P-201ENST00000516363 108 ntBASIC1.43□□□□□ -2.18
MSH4O15457 RNU6-856P-201ENST00000516959 98 ntBASIC1.43□□□□□ -2.18
MSH4O15457 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.43□□□□□ -2.18
MSH4O15457 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.43□□□□□ -2.18
MSH4O15457 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.43□□□□□ -2.18
MSH4O15457 MIR8070-201ENST00000616510 88 ntBASIC1.43□□□□□ -2.18
MSH4O15457 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms