Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC016632.1-201ENST00000503994 196 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC107393.1-201ENST00000512403 346 ntBASIC1.81□□□□□ -2.12
CDX4O14627 ACA59.1-201ENST00000515966 143 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.81□□□□□ -2.12
CDX4O14627 DNAJC19P9-201ENST00000555084 351 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.81□□□□□ -2.12
CDX4O14627 MIR4273-201ENST00000582824 84 ntBASIC1.81□□□□□ -2.12
CDX4O14627 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
CDX4O14627 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.81□□□□□ -2.12
CDX4O14627 AC131280.1-202ENST00000624067 4211 ntBASIC1.81□□□□□ -2.12
CDX4O14627 AL596028.1-201ENST00000326971 197 ntBASIC1.8□□□□□ -2.12
CDX4O14627 Y_RNA.31-201ENST00000362574 102 ntBASIC1.8□□□□□ -2.12
CDX4O14627 RNU6-1285P-201ENST00000363480 105 ntBASIC1.8□□□□□ -2.12
CDX4O14627 Y_RNA.197-201ENST00000364004 102 ntBASIC1.8□□□□□ -2.12
CDX4O14627 RNU1-148P-201ENST00000384472 162 ntBASIC1.8□□□□□ -2.12
CDX4O14627 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CDX4O14627 RNU6-308P-201ENST00000390957 107 ntBASIC1.8□□□□□ -2.12
CDX4O14627 BTF3L4P2-201ENST00000392798 346 ntBASIC1.8□□□□□ -2.12
CDX4O14627 RNU6-174P-201ENST00000410406 106 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AP000275.1-201ENST00000411943 390 ntBASIC1.8□□□□□ -2.12
CDX4O14627 EIF1AXP1-201ENST00000419267 435 ntBASIC1.8□□□□□ -2.12
CDX4O14627 USMG5P1-201ENST00000425964 177 ntBASIC1.8□□□□□ -2.12
CDX4O14627 RPL23AP50-201ENST00000434149 455 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AC244670.1-201ENST00000436879 112 ntBASIC1.8□□□□□ -2.12
CDX4O14627 MTCYBP6-201ENST00000441810 138 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AL031659.1-201ENST00000447075 539 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX4O14627 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX4O14627 SNRPGP7-201ENST00000469016 106 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.8□□□□□ -2.12
CDX4O14627 RNU6-567P-201ENST00000516746 107 ntBASIC1.8□□□□□ -2.12
CDX4O14627 CBX3P8-201ENST00000532412 525 ntBASIC1.8□□□□□ -2.12
CDX4O14627 HSPE1P4-201ENST00000550617 308 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AC007375.1-201ENST00000554513 578 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AC020661.2-201ENST00000560114 134 ntBASIC1.8□□□□□ -2.12
CDX4O14627 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CDX4O14627 AP001836.1-201ENST00000604675 523 ntBASIC1.8□□□□□ -2.12
CDX4O14627 AC018889.1-201ENST00000605372 397 ntBASIC1.8□□□□□ -2.12
CDX4O14627 MIR8076-201ENST00000611401 83 ntBASIC1.8□□□□□ -2.12
CDX4O14627 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CDX4O14627 MTND5P10-201ENST00000603719 1809 ntBASIC1.8□□□□□ -2.12
CDX4O14627 RNU6-227P-201ENST00000362865 103 ntBASIC1.79□□□□□ -2.12
CDX4O14627 SNORD50.1-201ENST00000362987 71 ntBASIC1.79□□□□□ -2.12
CDX4O14627 Y_RNA.123-201ENST00000363338 102 ntBASIC1.79□□□□□ -2.12
CDX4O14627 RNU6-596P-201ENST00000365395 98 ntBASIC1.79□□□□□ -2.12
CDX4O14627 RNU6-142P-201ENST00000384019 107 ntBASIC1.79□□□□□ -2.12
CDX4O14627 Y_RNA.533-201ENST00000384596 114 ntBASIC1.79□□□□□ -2.12
CDX4O14627 SNORA75.6-201ENST00000391318 127 ntBASIC1.79□□□□□ -2.12
CDX4O14627 MIR1302-11-201ENST00000408051 138 ntBASIC1.79□□□□□ -2.12
CDX4O14627 MIR1302-9-201ENST00000408365 138 ntBASIC1.79□□□□□ -2.12
CDX4O14627 MIR1302-10-201ENST00000408734 138 ntBASIC1.79□□□□□ -2.12
CDX4O14627 AC243428.1-201ENST00000421099 264 ntBASIC1.79□□□□□ -2.12
CDX4O14627 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX4O14627 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX4O14627 Y_RNA.639-201ENST00000458981 102 ntBASIC1.79□□□□□ -2.12
CDX4O14627 AC022493.2-201ENST00000506122 481 ntBASIC1.79□□□□□ -2.12
CDX4O14627 AC091874.1-201ENST00000511402 339 ntBASIC1.79□□□□□ -2.12
CDX4O14627 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.79□□□□□ -2.12
CDX4O14627 RNU6-470P-201ENST00000515954 104 ntBASIC1.79□□□□□ -2.12
CDX4O14627 RNU5F-2P-201ENST00000516066 82 ntBASIC1.79□□□□□ -2.12
CDX4O14627 RNA5SP490-201ENST00000517141 136 ntBASIC1.79□□□□□ -2.12
CDX4O14627 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.79□□□□□ -2.12
CDX4O14627 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.79□□□□□ -2.12
CDX4O14627 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
CDX4O14627 BX248123.2-201ENST00000606318 124 ntBASIC1.79□□□□□ -2.12
CDX4O14627 MIR1302-2-201ENST00000607096 138 ntBASIC1.79□□□□□ -2.12
CDX4O14627 AC133104.2-201ENST00000615272 193 ntBASIC1.79□□□□□ -2.12
CDX4O14627 uc_338.22-201ENST00000622722 187 ntBASIC1.79□□□□□ -2.12
CDX4O14627 AC134503.1-201ENST00000633048 54 ntBASIC1.79□□□□□ -2.12
CDX4O14627 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CDX4O14627 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
CDX4O14627 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDX4O14627 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDX4O14627 Y_RNA.128-201ENST00000363391 112 ntBASIC1.78□□□□□ -2.12
CDX4O14627 SNORA16B-201ENST00000364674 135 ntBASIC1.78□□□□□ -2.12
CDX4O14627 SNORD32A-201ENST00000364805 84 ntBASIC1.78□□□□□ -2.12
CDX4O14627 RNU6-1040P-201ENST00000383974 107 ntBASIC1.78□□□□□ -2.12
CDX4O14627 Y_RNA.445-201ENST00000384168 102 ntBASIC1.78□□□□□ -2.12
CDX4O14627 MIR559-201ENST00000385188 96 ntBASIC1.78□□□□□ -2.12
CDX4O14627 AL355497.1-201ENST00000406262 551 ntBASIC1.78□□□□□ -2.12
CDX4O14627 MIR548P-201ENST00000408336 84 ntBASIC1.78□□□□□ -2.12
CDX4O14627 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.78□□□□□ -2.12
CDX4O14627 RPL23AP95-201ENST00000426806 265 ntBASIC1.78□□□□□ -2.12
CDX4O14627 AL353997.1-201ENST00000432936 108 ntBASIC1.78□□□□□ -2.12
CDX4O14627 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDX4O14627 RNU7-95P-201ENST00000459222 64 ntBASIC1.78□□□□□ -2.12
CDX4O14627 Y_RNA.631-201ENST00000459607 101 ntBASIC1.78□□□□□ -2.12
CDX4O14627 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.78□□□□□ -2.12
CDX4O14627 HMGB1P35-201ENST00000503360 598 ntBASIC1.78□□□□□ -2.12
CDX4O14627 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.78□□□□□ -2.12
CDX4O14627 AP003072.1-201ENST00000531740 145 ntBASIC1.78□□□□□ -2.12
CDX4O14627 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.78□□□□□ -2.12
CDX4O14627 AC021231.3-201ENST00000558497 370 ntBASIC1.78□□□□□ -2.12
CDX4O14627 MIR3126-201ENST00000577443 74 ntBASIC1.78□□□□□ -2.12
CDX4O14627 MIR3171-201ENST00000584270 74 ntBASIC1.78□□□□□ -2.12
CDX4O14627 AC078795.3-201ENST00000602913 472 ntBASIC1.78□□□□□ -2.12
CDX4O14627 SNRPGP17-201ENST00000603780 214 ntBASIC1.78□□□□□ -2.12
CDX4O14627 AL034555.1-201ENST00000604816 211 ntBASIC1.78□□□□□ -2.12
CDX4O14627 MIR6840-201ENST00000611937 71 ntBASIC1.78□□□□□ -2.12
CDX4O14627 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms